A message passing approach to Side Chain Positioning with applications in protein docking refinement.
Mohammad MoghadasiDima KozakovArtem B. MamonovPirooz VakiliSandor VajdaIoannis Ch. PaschalidisPublished in: CDC (2012)
Keyphrases
- message passing
- belief propagation
- probabilistic inference
- protein structure
- factor graphs
- protein sequences
- distributed systems
- approximate inference
- shared memory
- sum product algorithm
- inference in graphical models
- distributed shared memory
- ldpc codes
- junction tree
- protein protein interactions
- markov random field
- image processing
- multi view
- linear programming
- matrix multiplication
- np hard
- max product
- pairwise
- sum product
- preprocessing