Predicting peptide binding sites on protein surfaces by clustering chemical interactions.
Chengfei YanXiaoqin ZouPublished in: J. Comput. Chem. (2015)
Keyphrases
- binding sites
- protein protein
- dna binding
- virtual screening
- protein interaction
- predicting protein
- mass spectrometry
- amino acids
- protein protein interactions
- protein sequences
- protein function
- dna sequences
- gene expression
- interaction networks
- transcription factors
- high throughput
- sequence data
- clustering algorithm
- tandem mass spectra
- computational methods
- drosophila melanogaster
- genome wide
- sequence alignment
- transcription factor binding sites
- secondary structure
- protein structure
- regulatory elements
- biological sequences
- protein complexes
- drug discovery
- statistical significance
- protein interaction networks
- motif discovery
- ms ms
- cis regulatory
- high dimensionality
- microarray
- mass spectra
- molecular biology
- genome sequences
- protein families
- functional modules
- gene expression profiles