Using reconfigurable hardware to accelerate multiple sequence alignment with ClustalW.
Timothy F. OliverBertil SchmidtDarran NathanRalf ClemensDouglas L. MaskellPublished in: Bioinform. (2005)
Keyphrases
- multiple sequence alignment
- molecular biology
- reconfigurable hardware
- computational biology
- biological sequences
- low cost
- protein sequences
- hardware software
- protein structure
- hardware implementation
- functional units
- image processing
- evolvable hardware
- fine grain
- field programmable gate array
- hardware and software
- secondary structure
- phylogenetic trees
- genetic algorithm
- design methodology
- processing elements
- memory efficient
- real time
- sequence alignment