High-quality sequence clustering guided by network topology and multiple alignment likelihood.
Vincent MieleSimon PenelVincent DaubinFranck PicardDaniel KahnLaurent DuretPublished in: Bioinform. (2012)
Keyphrases
- network topology
- multiple alignment
- graph theoretic
- sequence alignment
- multiple sequence alignment
- protein sequences
- ad hoc networks
- network structure
- network topologies
- maximum likelihood
- routing protocol
- sequential pattern mining
- k means
- protein protein interactions
- mining sequential patterns
- self organizing maps
- secondary structure
- scoring function
- pairwise
- neural network
- computational biology
- metadata
- natural language processing