Metric learning on biological sequence embeddings.
Dhananjay KimothiAnkita ShuklaPravesh BiyaniSaket AnandJames M. HoganPublished in: SPAWC (2017)
Keyphrases
- learning problems
- metric learning
- biological sequences
- learning tasks
- multi task
- dimensionality reduction
- distance metric learning
- sequence data
- molecular biology
- protein sequences
- low dimensional
- computational biology
- biological data
- dna sequences
- semi supervised
- pairwise
- feature space
- distance metric
- manifold learning
- high dimensional data
- feature selection
- binding sites
- mahalanobis metric
- sequence databases
- data sets
- distance function
- high dimensional
- distance measure
- feature extraction
- neural network