Efficient SCOP-fold classification and retrieval using index-based protein substructure alignments.
Pin-Hao ChiBin PangDmitry KorkinChi-Ren ShyuPublished in: Bioinform. (2009)
Keyphrases
- protein classification
- protein sequences
- remote homology detection
- protein structure
- sequence alignment
- indexing structure
- image classification
- information retrieval
- string kernels
- support vector machine
- decision trees
- information retrieval systems
- pairwise
- feature space
- multiple sequence alignment
- machine learning
- support vector machine svm
- image database
- classification accuracy
- document retrieval
- kernel methods
- indexing techniques
- protein protein interactions
- protein structure prediction