Parallel String Graph Construction and Transitive Reduction for De Novo Genome Assembly.
Giulia GuidiOguz SelvitopiMarquita EllisLeonid OlikerKatherine A. YelickAydin BuluçPublished in: CoRR (2020)
Keyphrases
- graph construction
- human genome
- k nearest neighbor
- knn
- graph based semi supervised learning
- semi supervised learning
- semi supervised
- neighborhood graph
- genomic sequences
- dna sequences
- sequence data
- data structure
- spectral clustering
- label propagation
- subspace learning
- nearest neighbor
- semi supervised classification
- text classification
- support vector machine
- query processing
- feature selection