hybridSPAdes: an algorithm for hybrid assembly of short and long reads.
Dmitry AntipovAnton I. KorobeynikovJeffrey S. McLeanPavel A. PevznerPublished in: Bioinform. (2016)
Keyphrases
- preprocessing
- dynamic programming
- times faster
- learning algorithm
- objective function
- optimal solution
- single pass
- experimental evaluation
- high accuracy
- theoretical analysis
- optimization algorithm
- significant improvement
- computational cost
- improved algorithm
- simulated annealing
- detection algorithm
- neural network
- estimation algorithm
- long sequences
- tree structure
- least squares
- cost function
- k means
- image processing