A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes.
Anne-Kathrin SchultzMing ZhangThomas LeitnerCarla KuikenBette T. KorberBurkhard MorgensternMario StankePublished in: BMC Bioinform. (2006)
Keyphrases
- hidden markov models
- sequence data
- sequential data
- speech recognition
- hidden state
- gesture recognition
- markov models
- discriminative training
- conditional random fields
- markov model
- viterbi algorithm
- dynamic probabilistic networks
- hierarchical hidden markov model
- machine learning
- phylogenetic trees
- hidden states
- handwritten word recognition