Bette T. Korber

Publication Activity (10 Years)

Years Active: 2000-2016
Publications (10 Years): 3

Top Topics

Subcellular Localization

Domain Independent

Top Venues

PLoS Comput. Biol.

Database J. Biol. Databases Curation

Nucleic Acids Res.

Publications

Karina Yusim, Hyejin Yoon, Brian T. Foley, Shihai Feng, Jennifer Macke, Mira Dimitrijevic, Werner Abfalterer, James Szinger, Will Fischer, Carla Kuiken, Bette T. Korber
Integrated sequence and immunology filovirus database at Los Alamos. Database J. Biol. Databases Curation 2016 (2016)
Jianhui Tian, Cesar A. López, Cynthia A. Derdeyn, Morris S. Jones, Abraham Pinter, Bette T. Korber, S. Gnanakaran
Effect of Glycosylation on an Immunodominant Region in the V1V2 Variable Domain of the HIV-1 Envelope gp120 Protein. PLoS Comput. Biol. 12 (10) (2016)
Hyejin Yoon, Jennifer Macke, Anthony P. West Jr., Brian T. Foley, Pamela J. Bjorkman, Bette T. Korber, Karina Yusim
CATNAP: a tool to compile, analyze and tally neutralizing antibody panels. Nucleic Acids Res. 43 (Webserver-Issue) (2015)
Anurag Sethi, Jianhui Tian, Cynthia A. Derdeyn, Bette T. Korber, S. Gnanakaran
A Mechanistic Understanding of Allosteric Immune Escape Pathways in the HIV-1 Envelope Glycoprotein. PLoS Comput. Biol. 9 (5) (2013)
Johanna Brodin, Mohan Krishnamoorthy, Gayathri Athreya, Will Fischer, Peter T. Hraber, Cheryl Gleasner, Lance Green, Bette T. Korber, Thomas Leitner
A multiple-alignment based primer design algorithm for genetically highly variable DNA targets. BMC Bioinform. 14 (2013)
Ingo Bulla, Anne-Kathrin Schultz, Fabian Schreiber, Ming Zhang, Thomas Leitner, Bette T. Korber, Burkhard Morgenstern, Mario Stanke
HIV classification using the coalescent theory. Bioinform. 26 (11) (2010)
S. Gnanakaran, Marcus G. Daniels, Tanmoy Bhattacharya, Alan S. Lapedes, Anurag Sethi, Ming Li, Haili Tang, Kelli Greene, Hongmei Gao, Barton F. Haynes, Myron S. Cohen, George M. Shaw, Michael S. Seaman, Amit Kumar, Feng Gao, David C. Montefiori, Bette T. Korber
Genetic Signatures in the Envelope Glycoproteins of HIV-1 that Associate with Broadly Neutralizing Antibodies. PLoS Comput. Biol. 6 (10) (2010)
Elena E. Giorgi, Bob Funkhouser, Gayathri Athreya, Alan S. Perelson, Bette T. Korber, Tanmoy Bhattacharya
Estimating time since infection in early homogeneous HIV-1 samples using a poisson model. BMC Bioinform. 11 (2010)
Anne-Kathrin Schultz, Ming Zhang, Ingo Bulla, Thomas Leitner, Bette T. Korber, Burkhard Morgenstern, Mario Stanke
jpHMM: Improving the reliability of recombination prediction in HIV-1. Nucleic Acids Res. 37 (Web-Server-Issue) (2009)
Will Fischer, H. X. Liao, Barton F. Haynes, Norman L. Letvin, Bette T. Korber
Coping with Viral Diversity in HIV Vaccine Design: A Response to Nickle et al. PLoS Comput. Biol. 4 (1) (2008)
James Thurmond, Hyejin Yoon, Carla Kuiken, Karina Yusim, Simon Perkins, James Theiler, Tanmoy Bhattacharya, Bette T. Korber, Will Fischer
Web-based design and evaluation of T-cell vaccine candidates. Bioinform. 24 (14) (2008)
Bette T. Korber, Montiago LaBute, Karina Yusim
Immunoinformatics Comes of Age. PLoS Comput. Biol. 2 (6) (2006)
Peter T. Hraber, Bette T. Korber, Steven Wolinsky, Henry A. Erlich, Elizabeth A. Trachtenberg, Thomas B. Kepler
HLA and HIV Infection Progression: Application of the Minimum Description Length Principle to Statistical Genetics. ISBMDA (2006)
Anne-Kathrin Schultz, Ming Zhang, Thomas Leitner, Carla Kuiken, Bette T. Korber, Burkhard Morgenstern, Mario Stanke
A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes. BMC Bioinform. 7 (2006)
Ming Zhang, Anne-Kathrin Schultz, Charles Calef, Carla Kuiken, Thomas Leitner, Bette T. Korber, Burkhard Morgenstern, Mario Stanke
jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1. Nucleic Acids Res. 34 (Web-Server-Issue) (2006)
Peter T. Hraber, Bette T. Korber, Steven Wolinsky, Henry A. Erlich, Elizabeth A. Trachtenberg, Thomas B. Kepler
HLA and HIV Infection Progression: Application of the Minimum Description Length Principle to Statistical Genetics CoRR (2005)
Brian Gaschen, Carla Kuiken, Bette T. Korber, Brian T. Foley
Retrieval and on-the-fly alignment of sequence fragments from the HIV database. Bioinform. 17 (5) (2001)
Patrick P. Rose, Bette T. Korber
Detecting hypermutations in viral sequences with an emphasis on G A hypermutation. Bioinform. 16 (4) (2000)