A Resistive CAM Processing-in-Storage Architecture for DNA Sequence Alignment.
Roman KaplanLeonid YavitsRan GinosarUri C. WeiserPublished in: CoRR (2017)
Keyphrases
- sequence alignment
- binding sites
- real time
- pairwise
- processing capabilities
- comparative genomics
- phylogenetic analysis
- parallel architecture
- random access
- memory management
- protein sequences
- information processing
- dynamic programming
- multiple alignment
- multiple sequence alignment
- smith waterman
- processing elements
- processing units
- gpu accelerated
- data sets
- central processor
- dna computing
- sequence data
- dna sequences
- storage devices
- sequence databases
- amino acids
- gene expression