Motif-guided sparse decomposition of gene expression data for regulatory module identification.
Ting GongJianhua XuanLi ChenRebecca B. RigginsHuai LiEric P. HoffmanRobert ClarkeYue Joseph WangPublished in: BMC Bioinform. (2011)
Keyphrases
- gene expression data
- transcription factors
- gene expression
- microarray
- gene regulation
- analysis of gene expression data
- microarray data
- high dimensional
- regulatory networks
- binding sites
- gene expression analysis
- data sets
- gene regulatory networks
- gene expression datasets
- high dimensionality
- gene expression data analysis
- high throughput
- cancer classification
- microarray gene expression data
- gene ontology
- gene expression profiling
- gene selection
- gene expression profiles
- motif discovery
- microarray gene expression
- dna microarray
- gene expression patterns
- clustering gene expression data
- microarray datasets
- biological processes
- gene networks
- dna sequences
- high dimensional data
- feature selection
- gene clusters
- gene expression data sets
- cancer diagnosis
- component analysis
- biological networks
- molecular biology
- database