ILP Characterization of 3D Protein-Binding Sites and FCA-Based Interpretation.
Emmanuel BressoRenaud GrisoniMarie-Dominique DevignesAmedeo NapoliMalika Smaïl-TabbonePublished in: IC3K (2012)
Keyphrases
- binding sites
- dna binding
- protein protein
- sequence alignment
- regulatory elements
- drosophila melanogaster
- transcription factor binding sites
- dna sequences
- protein interaction
- gene expression
- transcription factors
- sequence data
- protein families
- influenza virus
- motif discovery
- statistical significance
- cis regulatory
- biological sequences
- protein sequences
- protein function
- regulatory networks
- predicting protein
- protein protein interactions
- biological processes
- genome wide
- computational methods
- protein structure
- sequence databases
- genome sequences
- saccharomyces cerevisiae
- coding regions
- high throughput
- data mining
- protein protein interaction networks
- amino acids
- gene expression data
- statistically significant