AptaCluster - A Method to Cluster HT-SELEX Aptamer Pools and Lessons from Its Application.
Jan HoinkaAlexey BerezhnoyZuben E. SaunaEli GilboaTeresa M. PrzytyckaPublished in: RECOMB (2014)
Keyphrases
- experimental evaluation
- high accuracy
- synthetic data
- computational cost
- detection method
- objective function
- segmentation method
- support vector machine
- cost function
- machine learning
- theoretical analysis
- pairwise
- preprocessing
- data sets
- fully automatic
- optimization method
- high precision
- lessons learned
- spectral clustering
- unsupervised clustering
- clustering method
- support vector machine svm
- computationally efficient
- semi supervised
- probabilistic model
- dynamic programming
- artificial neural networks
- image retrieval
- computational complexity
- feature extraction