IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis.
Yana SafonovaStefano BonissoneEugene KurpilyanskyEkaterina StarostinaAlla L. LapidusJeremy StinsonLaura DePalatisWendy SandovalJennie LillPavel A. PevznerPublished in: Bioinform. (2015)
Keyphrases
- times faster
- high accuracy
- experimental evaluation
- detection algorithm
- search space
- recognition algorithm
- learning algorithm
- optimal solution
- k means
- data mining
- computational cost
- np hard
- single pass
- improved algorithm
- probabilistic model
- data sets
- hybrid algorithm
- linear programming
- expectation maximization
- clustering method
- theoretical analysis
- estimation algorithm
- selection algorithm
- convergence rate
- memory requirements
- image sequences
- tree structure
- similarity measure
- multi objective
- particle swarm optimization
- input data
- computational intelligence
- computational complexity
- worst case
- denoising
- data analysis
- significant improvement
- dynamic programming