Zhihua Du

Publication Activity (10 Years)

Years Active: 2004-2024
Publications (10 Years): 24

Top Topics

Multiobjective Evolutionary Algorithm

Intrinsically Disordered

Protein Function Prediction

Top Venues

Appl. Soft Comput.

IEEE ACM Trans. Comput. Biol. Bioinform.

Comput. Biol. Chem.

Publications

Bin Lv, Mingguang Sun, Yejie Shan, Xiangyu Cao, Zhihua Du, Xinfeng Liu, Rongju Zhang, Xiaochang Leng, Jens Fiehler, Adnan H. Siddiqui, Jianping Xiang, Jun Wang
AneuGuide™ software-assisted vs. manual measurements in sizing for pipeline embolization device: An agreement study. Comput. Biol. Medicine 168 (2024)
Ling-Yan Gu, Ting-Bo Chen, Jianqiang Li, Yu-An Huang, Zhihua Du, Victor C. M. Leung, Jie Chen
Hybrid Bayesian Optimization-Based Graphical Discovery for Methylation Sites Prediction. IEEE J. Biomed. Health Informatics 28 (4) (2024)
Zhihua Du, Tianyou Huang, Vladimir N. Uversky, Jianqiang Li
Predicting TF Proteins by Incorporating Evolution Information Through PSSM. IEEE ACM Trans. Comput. Biol. Bioinform. 20 (2) (2023)
Yuhao Wang, Yong Zuo, Zhihua Du, Xiaohan Song, Tian Luo, Xiaobin Hong, Jian Wu
MInet: A Novel Network Model for Point Cloud Processing by Integrating Multi-Modal Information. Sensors 23 (14) (2023)
Zhihua Du, Tianyou Huang, Jian-Qiang Li, Vladimir N. Uversky
TFBSnet: A deep learning-based tool for predicting transcription factor binding site from DNA sequences. BIBM (2023)
Zhihua Du, Xin Xia, Min Fang, Li Yu, Jianqiang Li
A Deep Transfer Fusion Model for Recognition of Acute Lymphoblastic Leukemia with Few Samples. ICIC (2) (2023)
Yang-Han Wu, Yu-An Huang, Jian-Qiang Li, Zhu-Hong You, Peng-Wei Hu, Lun Hu, Victor C. M. Leung, Zhihua Du
Knowledge graph embedding for profiling the interaction between transcription factors and their target genes. PLoS Comput. Biol. 19 (6) (2023)
Zhihua Du, Jun-Peng Zhong, Yun Liu, Jian-Qiang Li
Prokaryotic virus host prediction with graph contrastive augmentaion. PLoS Comput. Biol. 19 (12) (2023)
Zhihua Du, Xing Zhong, Min Fang, Jianqiang Li
GeneSpider: Inferring Gene Regulation Relationships Through Graph Neural Network from Single-Cell RNA Sequence Data. ICIC (3) (2023)
Haoyuan Pan, Yu Zhou, Tse-Tin Chan, Ming Tang, Jianqiang Li, Zhihua Du
Improving Information Freshness via Backbone-Assisted Cooperative Access Points. IEEE Internet Things J. 10 (5) (2023)
Haoyuan Pan, Yu Zhou, Tse-Tin Chan, Ming Tang, Jianqiang Li, Zhihua Du
Improving Information Freshness via Backbone-Assisted Cooperative Access Points. CoRR (2022)
Min Fang, Yufeng He, Zhihua Du, Vladimir N. Uversky
DeepCLD: An Efficient Sequence-Based Predictor of Intrinsically Disordered Proteins. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (6) (2022)
Zhihua Du, Yang-Han Wu, Yu-An Huang, Jie Chen, Gui-Qing Pan, Lun Hu, Zhu-Hong You, Jian-Qiang Li
GraphTGI: an attention-based graph embedding model for predicting TF-target gene interactions. Briefings Bioinform. 23 (3) (2022)
Zhihua Du, Yong Zuo, Jifang Qiu, Xiang Li, Yan Li, Hongxiang Guo, Xiaobin Hong, Jian Wu
MDCS with fully encoding the information of local shape description for 3D Rigid Data matching. Image Vis. Comput. 121 (2022)
Zhihua Du, Xing Zhong, Fangzhong Wang, Vladimir N. Uversky
Inference of gene regulatory networks based on the Light Gradient Boosting Machine. Comput. Biol. Chem. 101 (2022)
Quanjia Ren, Tse-Tin Chan, Haoyuan Pan, Kin-Hon Ho, Zhihua Du
Information Freshness and Energy Harvesting Tradeoff in Network-Coded Broadcasting. IEEE Wirel. Commun. Lett. 11 (10) (2022)
Zhihua Du, Yufeng He, Jianqiang Li, Vladimir N. Uversky
DeepAdd: Protein function prediction from k-mer embedding and additional features. Comput. Biol. Chem. 89 (2020)
Xin Liu, Zhihua Du, Tao Han, Dhanjoo N. Ghista, Shi Lin, Vicky Wang, Jun Wang, Heye Zhang, Zhigeng Pan
Quantitative Analysis of Blood Flow in Cerebral Venous Sinus With Stenosis by Patient-Specific CFD Modeling. IEEE Access 7 (2019)
Qiuzhen Lin, Chaoyu Tang, Yueping Ma, Zhihua Du, Jianqiang Li, Jianyong Chen, Zhong Ming
A novel adaptive control strategy for decomposition-based multiobjective algorithm. Comput. Oper. Res. 78 (2017)
Genghui Li, Qiuzhen Lin, Laizhong Cui, Zhihua Du, Zhengping Liang, Jianyong Chen, Nan Lu, Zhong Ming
A novel hybrid differential evolution algorithm with modified CoDE and JADE. Appl. Soft Comput. 47 (2016)
Laizhong Cui, Genghui Li, Qiuzhen Lin, Zhihua Du, Weifeng Gao, Jianyong Chen, Nan Lu
A novel artificial bee colony algorithm with depth-first search framework and elite-guided search equation. Inf. Sci. (2016)
Qiuzhen Lin, Zhiwang Liu, Qiao Yan, Zhihua Du, Carlos A. Coello Coello, Zhengping Liang, Wenjun Wang, Jianyong Chen
Adaptive composite operator selection and parameter control for multiobjective evolutionary algorithm. Inf. Sci. 339 (2016)
Qingling Zhu, Qiuzhen Lin, Zhihua Du, Zhengping Liang, Wenjun Wang, Zexuan Zhu, Jianyong Chen, Peizhi Huang, Zhong Ming
A novel adaptive hybrid crossover operator for multiobjective evolutionary algorithm. Inf. Sci. 345 (2016)
Zhengping Liang, Jiangtao Sun, Qiuzhen Lin, Zhihua Du, Jianyong Chen, Zhong Ming
A novel multiple rule sets data classification algorithm based on ant colony algorithm. Appl. Soft Comput. 38 (2016)
Qiuzhen Lin, Jianqiang Li, Zhihua Du, Jianyong Chen, Zhong Ming
A novel multi-objective particle swarm optimization with multiple search strategies. Eur. J. Oper. Res. 247 (3) (2015)
Zhengping Liang, Ruizhen Song, Qiuzhen Lin, Zhihua Du, Jianyong Chen, Zhong Ming, Jianping Yu
A double-module immune algorithm for multi-objective optimization problems. Appl. Soft Comput. 35 (2015)
Keke Gai, Zhihua Du, Meikang Qiu, Hui Zhao
Efficiency-Aware Workload Optimizations of Heterogeneous Cloud Computing for Capacity Planning in Financial Industry. CSCloud (2015)
Zhihua Du, Jinyuan Du
Orthogonal trigonometric polynomials: Riemann-Hilbert analysis and relations with OPUC. Asymptot. Anal. 79 (1-2) (2012)
Xing Chen, Zhihua Du, Jixiang Meng
Coloring and the Lovász Local Lemma. Appl. Math. Lett. 23 (3) (2010)
Zhihua Du, Yiwei Wang, Zhen Ji
Gene clustering using an evolutionary algorithm. IEEE Congress on Evolutionary Computation (2008)
Zhihua Du, Zhen Ji
A New Algorithm for Reconstruction of Phylogenetic Tree. AIRS (2008)
Zhihua Du, Yiwei Wang, Zhen Ji
PK-means: A new algorithm for gene clustering. Comput. Biol. Chem. 32 (4) (2008)
Zhihua Du, Zhen Ji, Feng Lin
Parallel Computing for Optimal Genomic Sequence Alignment. FSKD (2006)
Zhihua Du, Feng Lin
pNJTree: A parallel program for reconstruction of neighbor-joining tree and its application in ClustalW. Parallel Comput. 32 (5-6) (2006)
Zhihua Du, Feng Lin
Pattern-constrained multiple polypeptide sequence alignment. Comput. Biol. Chem. 29 (4) (2005)
Zhihua Du, Feng Lin, Usman W. Roshan
Reconstruction of large phylogenetic trees: A parallel approach. Comput. Biol. Chem. 29 (4) (2005)
Zhihua Du, Feng Lin
A novel parallelization approach for hierarchical clustering. Parallel Comput. 31 (5) (2005)
Zhihua Du, Feng Lin
Improvement of the Needleman-Wunsch Algorithm. Rough Sets and Current Trends in Computing (2004)
Zhihua Du, Feng Lin
A hierarchical clustering algorithm for MIMD architecture. Comput. Biol. Chem. 28 (5-6) (2004)