Yuko Makita

Publication Activity (10 Years)

Years Active: 2004-2013
Publications (10 Years): 0

Top Topics

Statistical Inference

Biomedical Text Mining

Top Venues

Nucleic Acids Res.

Publications

Robert Sidney Cox III, Koro Nishikata, Sayoko Shimoyama, Yuko Yoshida, Minami Matsui, Yuko Makita, Tetsuro Toyoda
PromoterCAD: data-driven design of plant regulatory DNA. Nucleic Acids Res. 41 (Webserver-Issue) (2013)
Yuko Makita, Norio Kobayashi, Yuko Yoshida, Koji Doi, Yoshiki Mochizuki, Koro Nishikata, Akihiro Matsushima, Satoshi Takahashi, Manabu Ishii, Terue Takatsuki, Rinki Bhatia, Zolzaya Khadbaatar, Hajime Watabe, Hiroshi Masuya, Tetsuro Toyoda
PosMed: ranking genes and bioresources based on Semantic Web Association Study. Nucleic Acids Res. 41 (Webserver-Issue) (2013)
Norio Kobayashi, Yuko Makita, Manabu Ishii, Akihiro Matsushima, Yoshiki Mochizuki, Koji Doi, Koro Nishikata, David Gifford, Terue Takatsuki, Hiroshi Masuya, Tetsuro Toyoda
PosMed: A Biomedical Entity Prioritisation Tool Based on Statistical Inference over Literature and the Semantic Web. SWAT4LS (2013)
Hiroshi Masuya, Terue Takatsuki, Yuko Makita, Yuko Yoshida, Yoshiki Mochizuki, Norio Kobayashi, Atsushi Yoshiki, Yukio Nakamura, Tetsuro Toyoda, Yuichi Obata
Development of Linked Open Data for Bioresources. JIST (2012)
Hiroshi Masuya, Yuko Makita, Norio Kobayashi, Koro Nishikata, Yuko Yoshida, Yoshiki Mochizuki, Koji Doi, Terue Takatsuki, Kazunori Waki, Nobuhiko Tanaka, Manabu Ishii, Akihiro Matsushima, Satoshi Takahashi, Atsushi Hijikata, Kouji Kozaki, Teiichi Furuichi, Hideya Kawaji, Shigeharu Wakana, Yukio Nakamura, Atsushi Yoshiki, Takehide Murata, Kaoru Fukami-Kobayashi, S. Sujatha Mohan, Osamu Ohara, Yoshihide Hayashizaki, Riichiro Mizoguchi, Yuichi Obata, Tetsuro Toyoda
The RIKEN integrated database of mammals. Nucleic Acids Res. 39 (Database-Issue) (2011)
Akihiro Matsushima, Norio Kobayashi, Yoshiki Mochizuki, Manabu Ishii, Shuji Kawaguchi, Takaho A. Endo, Ryo Umetsu, Yuko Makita, Tetsuro Toyoda
OmicBrowse: a Flash-based high-performance graphics interface for genomic resources. Nucleic Acids Res. 37 (Web-Server-Issue) (2009)
Yuko Yoshida, Yuko Makita, Naohiko Heida, Satomi Asano, Akihiro Matsushima, Manabu Ishii, Yoshiki Mochizuki, Hiroshi Masuya, Shigeharu Wakana, Norio Kobayashi, Tetsuro Toyoda
PosMed (Positional Medline): prioritizing genes with an artificial neural network comprising medical documents to accelerate positional cloning. Nucleic Acids Res. 37 (Web-Server-Issue) (2009)
K. Rao Raghuraj, Kyaw Tun, Yuko Makita, Samavedham Lakshminarayanan, Pawan K. Dhar
Amino-Acid Residue Association Models for Large Scale Protein-Protein Interaction Prediction. Silico Biol. 9 (4) (2009)
Norio Kobayashi, Yuko Makita, Eli Kaminuma, Shuji Kawaguchi, Yuko Yoshida, Yoshiki Mochizuki, Akihiro Matsushima, Manabu Ishii, Ryo Umetsu, Satomi Asano, Naohiko Heida, Tetsuya Sakurai, Takashi Kuromori, Kazuo Shinozaki, Tetsuro Toyoda
A Secure Data Repository Integrating Huge Volumes of Digital Contents as a Semantic Web. SWAT4LS (2008)
Nicolas Sierro, Yuko Makita, Michiel J. L. de Hoon, Kenta Nakai
containing upstream intergenic conservation information. Nucleic Acids Res. 36 (Database-Issue) (2008)
Yuko Makita, Michiel J. L. de Hoon, Antoine Danchin
Hon-yaku: a biology-driven Bayesian methodology for identifying translation initiation sites in prokaryotes. BMC Bioinform. 8 (2007)
Toshiyuki Okumura, Hiroki Makiguchi, Yuko Makita, Riu Yamashita, Kenta Nakai
Melina II: a web tool for comparisons among several predictive algorithms to find potential motifs from promoter regions. Nucleic Acids Res. 35 (Web-Server-Issue) (2007)
Yuko Makita, Michiel J. L. de Hoon, Naotake Ogasawara, Satoru Miyano, Kenta Nakai
Bayesian Joint Prediction of Associated Transcription Factors in Bacillus subtilis. Pacific Symposium on Biocomputing (2005)
Michiel J. L. de Hoon, Yuko Makita, Kenta Nakai, Satoru Miyano
and Related Species. PLoS Comput. Biol. 1 (3) (2005)
Michiel J. L. de Hoon, Yuko Makita, Seiya Imoto, Kazuo Kobayashi, Naotake Ogasawara, Kenta Nakai, Satoru Miyano
Predicting gene regulation by sigma factors in Bacillus subtilis from genome-wide data. ISMB/ECCB (Supplement of Bioinformatics) (2004)
Yuko Makita, Mitsuteru Nakao, Naotake Ogasawara, Kenta Nakai
BTBS: database of transcriptional regulation in Bacillus subtilis and its contribution to comparative genomics. Nucleic Acids Res. 32 (Database-Issue) (2004)