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Ying-Lian Gao
ORCID
Publication Activity (10 Years)
Years Active: 2015-2024
Publications (10 Years): 93
Top Topics
Matrix Factorization
Factorization Method
Gene Selection
Differentially Expressed
Top Venues
BIBM
IEEE J. Biomed. Health Informatics
IEEE ACM Trans. Comput. Biol. Bioinform.
ICIC (2)
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Publications
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Cui-Na Jiao
,
Junliang Shang
,
Feng Li
,
Xinchun Cui
,
Yan-Li Wang
,
Ying-Lian Gao
,
Jin-Xing Liu
Diagnosis-Guided Deep Subspace Clustering Association Study for Pathogenetic Markers Identification of Alzheimer's Disease Based on Comparative Atlases.
IEEE J. Biomed. Health Informatics
28 (5) (2024)
Jing Jing
,
Ying-Lian Gao
,
Yue Gao
,
Dao-Hui Ge
,
Chun-Hou Zheng
,
Jin-Xing Liu
stMCFN: A Multi-view Contrastive Fusion Method for Spatial Domain Identification in Spatial Transcriptomics.
ICIC (LNBI 1)
(2024)
Dai-Jun Zhang
,
Ying-Lian Gao
,
Jing-Xiu Zhao
,
Chun-Hou Zheng
,
Jin-Xing Liu
A New Graph Autoencoder-Based Consensus-Guided Model for scRNA-seq Cell Type Detection.
IEEE Trans. Neural Networks Learn. Syst.
35 (2) (2024)
Cui-Na Jiao
,
Feng Zhou
,
Bao-Min Liu
,
Chun-Hou Zheng
,
Jin-Xing Liu
,
Ying-Lian Gao
Multi-Kernel Graph Attention Deep Autoencoder for MiRNA-Disease Association Prediction.
IEEE J. Biomed. Health Informatics
28 (2) (2024)
Wen-Yue Kang
,
Ying-Lian Gao
,
Ying Wang
,
Feng Li
,
Jin-Xing Liu
KFDAE: CircRNA-Disease Associations Prediction Based on Kernel Fusion and Deep Auto-Encoder.
IEEE J. Biomed. Health Informatics
28 (5) (2024)
Bao-Min Liu
,
Ying-Lian Gao
,
Feng Li
,
Chun-Hou Zheng
,
Jin-Xing Liu
SLGCN: Structure-enhanced line graph convolutional network for predicting drug-disease associations.
Knowl. Based Syst.
283 (2024)
Cui-Na Jiao
,
Ying-Lian Gao
,
Daohui Ge
,
Junliang Shang
,
Jin-Xing Liu
Multi-modal imaging genetics data fusion by deep auto-encoder and self-representation network for Alzheimer's disease diagnosis and biomarkers extraction.
Eng. Appl. Artif. Intell.
130 (2024)
Wen-Yu Xi
,
Juan Wang
,
Yu-Lin Zhang
,
Jin-Xing Liu
,
Ying-Lian Gao
LncRNA-disease association prediction method based on heterogeneous information completion and convolutional neural network.
CoRR
(2024)
Yue Gao
,
Ying-Lian Gao
,
Jing Jing
,
Feng Li
,
Chun-Hou Zheng
,
Jin-Xing Liu
A review of recent advances in spatially resolved transcriptomics data analysis.
Neurocomputing
603 (2024)
Jin-Xing Liu
,
Wen-Yu Xi
,
Ling-Yun Dai
,
Chun-Hou Zheng
,
Ying-Lian Gao
Heterogeneous network and graph attention auto-encoder for LncRNA-disease association prediction.
CoRR
(2024)
Meng-Meng Yin
,
Ying-Lian Gao
,
Chun-Hou Zheng
,
Jin-Xing Liu
NTBiRW: A Novel Neighbor Model Based on Two-Tier Bi-Random Walk for Predicting Potential Disease-Related Microbes.
IEEE J. Biomed. Health Informatics
27 (3) (2023)
Ying Wang
,
Ying-Lian Gao
,
Juan Wang
,
Feng Li
,
Jin-Xing Liu
MSGCA: Drug-Disease Associations Prediction Based on Multi-Similarities Graph Convolutional Autoencoder.
IEEE J. Biomed. Health Informatics
27 (7) (2023)
Wen-Yu Xi
,
Feng Zhou
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Chun-Hou Zheng
LDCMFC: Predicting Long Non-Coding RNA and Disease Association Using Collaborative Matrix Factorization Based on Correntropy.
IEEE ACM Trans. Comput. Biol. Bioinform.
20 (3) (2023)
Yue Gao
,
Dai-Jun Zhang
,
Cui-Na Jiao
,
Ying-Lian Gao
,
Jin-Xing Liu
Spatial Domain Identification Based on Graph Attention Denoising Auto-encoder.
ICIC (3)
(2023)
Yi Shen
,
Ying-Lian Gao
,
Juan Wang
,
Boxin Guan
,
Jin-Xing Liu
Identification of Disease-Associated MicroRNAs Via Locality-Constrained Linear Coding-Based Ensemble Learning.
J. Comput. Biol.
30 (8) (2023)
Ying Wang
,
Jin-Xing Liu
,
Juan Wang
,
Junliang Shang
,
Ying-Lian Gao
A Graph Representation Approach Based on Light Gradient Boosting Machine for Predicting Drug-Disease Associations.
J. Comput. Biol.
30 (8) (2023)
Wen-Yue Kang
,
Chun-Hou Zheng
,
Ying-Lian Gao
,
Juan Wang
,
Junliang Shang
,
Jin-Xing Liu
GRPGAT: Predicting CircRNA-disease Associations Based on Graph Random Propagation Network and Graph Attention Network.
BIBM
(2023)
Guozheng Zhang
,
Ying-Lian Gao
BRWMC: Predicting lncRNA-disease associations based on bi-random walk and matrix completion on disease and lncRNA networks.
Comput. Biol. Chem.
103 (2023)
Jin-Xing Liu
,
Meng-Meng Yin
,
Ying-Lian Gao
,
Junliang Shang
,
Chun-Hou Zheng
MSF-LRR: Multi-Similarity Information Fusion Through Low-Rank Representation to Predict Disease-Associated Microbes.
IEEE ACM Trans. Comput. Biol. Bioinform.
20 (1) (2023)
Shuang Wang
,
Jin-Xing Liu
,
Bao-Min Liu
,
Ling-Yun Dai
,
Feng Li
,
Ying-Lian Gao
MKGSAGE: A Computational Framework via Multiple Kernel Fusion on GraphSAGE for Inferring Potential Disease-Related Microbes.
BIBM
(2023)
Ying-Lian Gao
,
Qian Qiao
,
Juan Wang
,
Shasha Yuan
,
Jin-Xing Liu
BioSTD: A New Tensor Multi-View Framework via Combining Tensor Decomposition and Strong Complementarity Constraint for Analyzing Cancer Omics Data.
IEEE J. Biomed. Health Informatics
27 (10) (2023)
Yi-Ming Wang
,
Xiang-Zhen Kong
,
Boxin Guan
,
Chun-Hou Zheng
,
Ying-Lian Gao
Identify Complex Higher-Order Associations Between Alzheimer's Disease Genes and Imaging Markers Through Improved Adaptive Sparse Multi-view Canonical Correlation Analysis.
ICIC (3)
(2023)
Jin-Xing Liu
,
Dai-Jun Zhang
,
Jing-Xiu Zhao
,
Chun-Hou Zheng
,
Ying-Lian Gao
Non-Negative Low-Rank Representation With Similarity Correction for Cell Type Identification in scRNA-Seq Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
20 (6) (2023)
Xu-Ran Dou
,
Wen-Yu Xi
,
Tian-Ru Wu
,
Cui-Na Jiao
,
Jin-Xing Liu
,
Ying-Lian Gao
LANCMDA: Predicting MiRNA-Disease Associations via LightGBM with Attributed Network Construction.
ICIC (3)
(2023)
Chuan-Yuan Wang
,
Ying-Lian Gao
,
Xiang-Zhen Kong
,
Jin-Xing Liu
,
Chun-Hou Zheng
Unsupervised Cluster Analysis and Gene Marker Extraction of scRNA-seq Data Based On Non-Negative Matrix Factorization.
IEEE J. Biomed. Health Informatics
26 (1) (2022)
Zhi-Yuan Li
,
Ying-Lian Gao
,
Zhen-Xin Niu
,
Sha-Sha Yuan
,
Chun-Hou Zheng
,
Jin-Xing Liu
An integrated Extreme learning machine based on kernel risk-sensitive loss of q-Gaussian and voting mechanism for sample classification.
BIBM
(2022)
Hang-Jin Yang
,
Yuxia Lei
,
Juan Wang
,
Xiang-Zhen Kong
,
Jin-Xing Liu
,
Ying-Lian Gao
Tensor decomposition based on the potential low-rank and p-shrinkage generalized threshold algorithm for analyzing cancer multiomics data.
J. Bioinform. Comput. Biol.
20 (2) (2022)
Chuan-Yuan Wang
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Xiang-Zhen Kong
,
Chun-Hou Zheng
Single-Cell RNA Sequencing Data Clustering by Low-Rank Subspace Ensemble Framework.
IEEE ACM Trans. Comput. Biol. Bioinform.
19 (2) (2022)
Meng-Meng Yin
,
Ying-Lian Gao
,
Junliang Shang
,
Chun-Hou Zheng
,
Jin-Xing Liu
Multi-similarity fusion-based label propagation for predicting microbes potentially associated with diseases.
Future Gener. Comput. Syst.
134 (2022)
Bao-Min Liu
,
Ying-Lian Gao
,
Dai-Jun Zhang
,
Feng Zhou
,
Juan Wang
,
Chun-Hou Zheng
,
Jin-Xing Liu
A new framework for drug-disease association prediction combing light-gated message passing neural network and gated fusion mechanism.
Briefings Bioinform.
23 (6) (2022)
Yi Shen
,
Ying-Lian Gao
,
Shu-Zhen Li
,
Boxin Guan
,
Jin-Xing Liu
A Locality-Constrained Linear Coding-Based Ensemble Learning Framework for Predicting Potentially Disease-Associated MiRNAs.
ISBRA
(2022)
Wen-Yu Xi
,
Qian-Qian Ren
,
Jin-Xing Liu
,
Ying-Lian Gao
HSAELDA: Predicting lncRNA-disease associations based on heterogeneous networks and Stacked Autoencoder.
BIBM
(2022)
Meng-Meng Yin
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Xiang-Zhen Kong
,
Chun-Hou Zheng
NCPLP: A Novel Approach for Predicting Microbe-Associated Diseases With Network Consistency Projection and Label Propagation.
IEEE Trans. Cybern.
52 (6) (2022)
Guo-Zheng Zhang
,
Shu-Zhen Li
,
Xu-Ran Dou
,
Junliang Shang
,
Qian-Qian Ren
,
Ying-Lian Gao
Predicting LncRNA-Disease Associations Based on LncRNA-MiRNA-Disease Multilayer Association Network and Bipartite Network Recommendation.
BIBM
(2022)
Ying-Lian Gao
,
Ming-Juan Wu
,
Jin-Xing Liu
,
Chun-Hou Zheng
,
Juan Wang
Robust Principal Component Analysis Based On Hypergraph Regularization for Sample Clustering and Co-Characteristic Gene Selection.
IEEE ACM Trans. Comput. Biol. Bioinform.
19 (4) (2022)
Ying Wang
,
Ying-Lian Gao
,
Juan Wang
,
Junliang Shang
,
Jin-Xing Liu
MLMVFE: A Machine Learning Approach Based on Muli-view Features Extraction for Drug-Disease Associations Prediction.
ISBRA
(2022)
Liang-Rui Ren
,
Ying-Lian Gao
,
Junliang Shang
,
Jin-Xing Liu
Kernel risk-sensitive mean p-power error based robust extreme learning machine for classification.
Int. J. Mach. Learn. Cybern.
13 (1) (2022)
Chuan-Yuan Wang
,
Na Yu
,
Ming-Juan Wu
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Juan Wang
Dual Hyper-Graph Regularized Supervised NMF for Selecting Differentially Expressed Genes and Tumor Classification.
IEEE ACM Trans. Comput. Biol. Bioinform.
18 (6) (2021)
Chuan-Yuan Wang
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Ling-Yun Dai
,
Junliang Shang
Sparse robust graph-regularized non-negative matrix factorization based on correntropy.
J. Bioinform. Comput. Biol.
19 (1) (2021)
Jin-Xing Liu
,
Zhen Cui
,
Ying-Lian Gao
,
Xiang-Zhen Kong
WGRCMF: A Weighted Graph Regularized Collaborative Matrix Factorization Method for Predicting Novel LncRNA-Disease Associations.
IEEE J. Biomed. Health Informatics
25 (1) (2021)
Yue Hu
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Junliang Shang
DSTPCA: Double-Sparse Constrained Tensor Principal Component Analysis Method for Feature Selection.
IEEE ACM Trans. Comput. Biol. Bioinform.
18 (4) (2021)
Ming-Ming Gao
,
Zhen Cui
,
Ying-Lian Gao
,
Juan Wang
,
Jin-Xing Liu
Multi-Label Fusion Collaborative Matrix Factorization for Predicting LncRNA-Disease Associations.
IEEE J. Biomed. Health Informatics
25 (3) (2021)
Ying-Lian Gao
,
Meng-Meng Yin
,
Jin-Xing Liu
,
Junliang Shang
,
Chun-Hou Zheng
MKL-LP: Predicting Disease-Associated Microbes with Multiple-Similarity Kernel Learning-Based Label Propagation.
ISBRA
(2021)
Qian Qiao
,
Ying-Lian Gao
,
Shasha Yuan
,
Jin-Xing Liu
Robust Tensor Method Based on Correntropy and Tensor Singular Value Decomposition for Cancer Genomics Data.
BIBM
(2021)
Dai-Jun Zhang
,
Jing-Xiu Zhao
,
Jin-Xing Liu
,
Ying-Lian Gao
Adaptive total-variation joint learning model for analyzing single cell RNA seq data.
BIBM
(2021)
Jin-Xing Liu
,
Ming-Ming Gao
,
Zhen Cui
,
Ying-Lian Gao
,
Feng Li
DSCMF: prediction of LncRNA-disease associations based on dual sparse collaborative matrix factorization.
BMC Bioinform.
(3) (2021)
Cui-Na Jiao
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Xiang-Zhen Kong
,
Chun-Hou Zheng
,
Xianzi Yu
Sparse Hyper-graph Non-negative Matrix Factorization by Maximizing Correntropy.
BIBM
(2021)
Liang-Rui Ren
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Xiang-Zhen Kong
,
Chun-Hou Zheng
Kernel Risk-Sensitive Loss based Hyper-graph Regularized Robust Extreme Learning Machine and Its Semi-supervised Extension for Classification.
Knowl. Based Syst.
227 (2021)
Meng-Meng Yin
,
Zhen Cui
,
Ming-Ming Gao
,
Jin-Xing Liu
,
Ying-Lian Gao
LWPCMF: Logistic Weighted Profile-Based Collaborative Matrix Factorization for Predicting MiRNA-Disease Associations.
IEEE ACM Trans. Comput. Biol. Bioinform.
18 (3) (2021)
Zhen-Xin Niu
,
Liang-Rui Ren
,
Rong Zhu
,
Xiang-Zhen Kong
,
Ying-Lian Gao
,
Jin-Xing Liu
Extreme Learning Machine Based on Double Kernel Risk-Sensitive Loss for Cancer Samples Classification.
ICIC (2)
(2021)
Cui-Na Jiao
,
Ying-Lian Gao
,
Na Yu
,
Jin-Xing Liu
,
Lianyong Qi
Hyper-Graph Regularized Constrained NMF for Selecting Differentially Expressed Genes and Tumor Classification.
IEEE J. Biomed. Health Informatics
24 (10) (2020)
Zhen Cui
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Rong Zhu
,
Shasha Yuan
LncRNA-Disease Associations Prediction Using Bipartite Local Model With Nearest Profile-Based Association Inferring.
IEEE J. Biomed. Health Informatics
24 (5) (2020)
Yao Lu
,
Ying-Lian Gao
,
Pei-Yong Li
,
Jin-Xing Liu
A multi-view classification and feature selection method via sparse low-rank regression analysis.
Int. J. Data Min. Bioinform.
24 (2) (2020)
Liang-Rui Ren
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Rong Zhu
,
Xiang-Zhen Kong
-Extreme Learning Machine: An Efficient Robust Classifier for Tumor Classification.
Comput. Biol. Chem.
89 (2020)
Tianru Wu
,
Meng-Meng Yin
,
Cui-Na Jiao
,
Ying-Lian Gao
,
Xiang-Zhen Kong
,
Jin-Xing Liu
MCCMF: collaborative matrix factorization based on matrix completion for predicting miRNA-disease associations.
BMC Bioinform.
21 (1) (2020)
Ming-Juan Wu
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Chun-Hou Zheng
,
Juan Wang
Integrative Hypergraph Regularization Principal Component Analysis for Sample Clustering and Co-Expression Genes Network Analysis on Multi-Omics Data.
IEEE J. Biomed. Health Informatics
24 (6) (2020)
Liang-Rui Ren
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Junliang Shang
,
Chun-Hou Zheng
Correntropy induced loss based sparse robust graph regularized extreme learning machine for cancer classification.
BMC Bioinform.
21 (1) (2020)
Liang-Rui Ren
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Xiang-Zhen Kong
,
Chun-Hou Zheng
Robust Graph Regularized Extreme Learning Machine Auto Encoder and Its Application to Single-Cell Samples Classification.
ICIC (2)
(2020)
Chuan-Yuan Wang
,
Ying-Lian Gao
,
Cui-Na Jiao
,
Jin-Xing Liu
,
Chunhou Zheng
,
Xiang-Zhen Kong
Locally Manifold Non-negative Matrix Factorization Based on Centroid for scRNA-seq Data Analysis.
BIBM
(2020)
Meng-Meng Yin
,
Zhen Cui
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Xiang-Zhen Kong
DSNPCMF: Predicting MiRNA-Disease Associations with Collaborative Matrix Factorization Based on Double Sparse and Nearest Profile.
IDMB
(2019)
Ming-Ming Gao
,
Zhen Cui
,
Ying-Lian Gao
,
Feng Li
,
Jin-Xing Liu
Dual Sparse Collaborative Matrix Factorization Method Based on Gaussian Kernel Function for Predicting LncRNA-Disease Associations.
ICIC (3)
(2019)
Chun-Mei Feng
,
Yong Xu
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Chun-Hou Zheng
Supervised Discriminative Sparse PCA for Com-Characteristic Gene Selection and Tumor Classification on Multiview Biological Data.
CoRR
(2019)
Zhen Cui
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Juan Wang
,
Junliang Shang
,
Ling-Yun Dai
The computational prediction of drug-disease interactions using the dual-network L2,1-CMF method.
BMC Bioinform.
20 (1) (2019)
Ying-Lian Gao
,
Zhen Cui
,
Jin-Xing Liu
,
Juan Wang
,
Chun-Hou Zheng
NPCMF: Nearest Profile-based Collaborative Matrix Factorization method for predicting miRNA-disease associations.
BMC Bioinform.
20 (1) (2019)
Ying-Lian Gao
,
Mi-Xiao Hou
,
Jin-Xing Liu
,
Xiang-Zhen Kong
An Integrated Graph Regularized Non-Negative Matrix Factorization Model for Gene Co-Expression Network Analysis.
IEEE Access
7 (2019)
Zhen Cui
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Chun-Hou Zheng
,
Juan Wang
RCMF: a robust collaborative matrix factorization method to predict miRNA-disease associations.
BMC Bioinform.
(25) (2019)
Yue Hu
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Shengjun Li
,
Juan Wang
Differentially Expressed Genes Extracted by the Tensor Robust Principal Component Analysis (TRPCA) Method.
Complex.
2019 (2019)
Chun-Mei Feng
,
Yong Xu
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Chun-Hou Zheng
Supervised Discriminative Sparse PCA for Com-Characteristic Gene Selection and Tumor Classification on Multiview Biological Data.
IEEE Trans. Neural Networks Learn. Syst.
30 (10) (2019)
Zhen Cui
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Ling-Yun Dai
,
Shasha Yuan
L2, 1-GRMF: an improved graph regularized matrix factorization method to predict drug-target interactions.
BMC Bioinform.
(8) (2019)
Mi-Xiao Hou
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Ling-Yun Dai
,
Xiang-Zhen Kong
,
Junliang Shang
Network analysis based on low-rank method for mining information on integrated data of multi-cancers.
Comput. Biol. Chem.
78 (2019)
Yong-Jing Hao
,
Ying-Lian Gao
,
Mi-Xiao Hou
,
Ling-Yun Dai
,
Jin-Xing Liu
Hypergraph Regularized Discriminative Nonnegative Matrix Factorization on Sample Classification and Co-Differentially Expressed Gene Selection.
Complex.
2019 (2019)
Jin-Xing Liu
,
Dong Wang
,
Ying-Lian Gao
,
Chun-Hou Zheng
,
Yong Xu
,
Jiguo Yu
Regularized Non-Negative Matrix Factorization for Identifying Differentially Expressed Genes and Clustering Samples: A Survey.
IEEE ACM Trans. Comput. Biol. Bioinform.
15 (3) (2018)
Mi-Xiao Hou
,
Jin-Xing Liu
,
Junliang Shang
,
Ying-Lian Gao
,
Xiang-Zhen Kong
,
Ling-Yun Dai
Performance Analysis of Non-negative Matrix Factorization Methods on TCGA Data.
ICIC (2)
(2018)
Na Yu
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Juan Wang
,
Junliang Shang
Hypergraph regularized NMF by L2, 1-norm for Clustering and Com-abnormal Expression Genes Selection.
BIBM
(2018)
Na Yu
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Chun-Hou Zheng
,
Juan Wang
,
Ming-Juan Wu
Graph regularized robust non-negative matrix factorization for clustering and selecting differentially expressed genes.
BIBM
(2017)
Jin-Xing Liu
,
Dong Wang
,
Ying-Lian Gao
,
Chun-Hou Zheng
,
Junliang Shang
,
Feng Liu
,
Yong Xu
-norm-constraint-based semi-supervised feature extraction for RNA-Seq data analysis.
Neurocomputing
228 (2017)
Ming-Juan Wu
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Xiangzhen Kong
,
Chun-Mei Feng
Feature selection and clustering via robust graph-laplacian PCA based on capped L1-norm.
BIBM
(2017)
Yaxuan Wang
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Chun-Hou Zheng
,
Ling-Yun Dai
Low-rank representation regularized by L2, 1-norm for identifying differentially expressed genes.
BIBM
(2017)
Xiu-Xiu Xu
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Yaxuan Wang
,
Ling-Yun Dai
,
Xiang-Zhen Kong
,
Shasha Yuan
A novel low-rank representation method for identifying differentially expressed genes.
Int. J. Data Min. Bioinform.
19 (3) (2017)
Jin-Xing Liu
,
Dong-Qin Wang
,
Chun-Hou Zheng
,
Ying-Lian Gao
,
Sha-Sha Wu
,
Junliang Shang
Identifying drug-pathway association pairs based on L2, 1-integrative penalized matrix decomposition.
BMC Syst. Biol.
11 (6) (2017)
Yaxuan Wang
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Xiangzhen Kong
,
Chun-Hou Zheng
,
Yong Du
Differentially expressed genes selection via Truncated Nuclear Norm Regularization.
BIBM
(2016)
Chun-Mei Feng
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Chun-Hou Zheng
,
Shengjun Li
,
Dong Wang
A Simple Review of Sparse Principal Components Analysis.
ICIC (2)
(2016)
Chun-Mei Feng
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Juan Wang
,
Dong-Qin Wang
,
Yong Du
A graph-Laplacian PCA based on L1/2-norm constraint for characteristic gene selection.
BIBM
(2016)
Yaxuan Wang
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Chun-Hou Zheng
,
Junliang Shang
Differentially expressed genes selection via Laplacian regularized low-rank representation method.
Comput. Biol. Chem.
65 (2016)
Jin-Xing Liu
,
Yong Xu
,
Ying-Lian Gao
,
Chun-Hou Zheng
,
Dong Wang
,
Qi Zhu
A Class-Information-Based Sparse Component Analysis Method to Identify Differentially Expressed Genes on RNA-Seq Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
13 (2) (2016)
Dong-Qin Wang
,
Chun-Hou Zheng
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Sha-Sha Wu
,
Junliang Shang
L21-iPaD: An efficient method for drug-pathway association pairs inference.
BIBM
(2016)
Mi-Xiao Hou
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Junliang Shang
,
Chun-Hou Zheng
Comparison of Non-negative Matrix Factorization Methods for Clustering Genomic Data.
ICIC (2)
(2016)
Yao Lu
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Chang-Gang Wen
,
Yaxuan Wang
,
Jiguo Yu
Characteristic gene selection via L2, 1-norm Sparse Principal Component Analysis.
BIBM
(2016)
Dong Wang
,
Jin-Xing Liu
,
Ying-Lian Gao
,
Chun-Hou Zheng
,
Yong Xu
Characteristic Gene Selection Based on Robust Graph Regularized Non-Negative Matrix Factorization.
IEEE ACM Trans. Comput. Biol. Bioinform.
13 (6) (2016)
Chun-Xia Ma
,
Ying-Lian Gao
,
Dong Wang
,
Jian Liu
,
Jin-Xing Liu
Graph Regularized Non-negative Matrix with L0-Constraints for Selecting Characteristic Genes.
ICIC (2)
(2015)
Jin-Xing Liu
,
Yong Xu
,
Ying-Lian Gao
,
Dong Wang
,
Chun-Hou Zheng
,
Junliang Shang
Semi-supervised Feature Extraction for RNA-Seq Data Analysis.
ICIC (3)
(2015)
Ying-Lian Gao
,
Jin-Xing Liu
,
Chun-Hou Zheng
,
Shengjun Li
,
Yuxia Lei
A Two-Stage Sparse Selection Method for Extracting Characteristic Genes.
ICIC (2)
(2015)
Dong Wang
,
Ying-Lian Gao
,
Jin-Xing Liu
,
Jiguo Yu
,
Chang-Gang Wen
Application of Graph Regularized Non-negative Matrix Factorization in Characteristic Gene Selection.
ICIC (2)
(2015)