Xuhua Yan

Publication Activity (10 Years)

Years Active: 2021-2023
Publications (10 Years): 7

Top Topics

Learning Frameworks

Top Venues

Briefings Bioinform.

Genom. Proteom. Bioinform.

Publications

Xuhua Yan, Ruiqing Zheng, Jinmiao Chen, Min Li
scNCL: transferring labels from scRNA-seq to scATAC-seq data with neighborhood contrastive regularization. Bioinform. 39 (8) (2023)
Siqi Chen, Xuhua Yan, Ruiqing Zheng, Min Li
Bubble: a fast single-cell RNA-seq imputation using an autoencoder constrained by bulk RNA-seq data. Briefings Bioinform. 24 (1) (2023)
Xuhua Yan, Ruiqing Zheng, Fang-Xiang Wu, Min Li
CLAIRE: contrastive learning-based batch correction framework for better balance between batch mixing and preservation of cellular heterogeneity. Bioinform. 39 (3) (2023)
Xuhua Yan, Ruiqing Zheng, Min Li
GLOBE: a contrastive learning-based framework for integrating single-cell transcriptome datasets. Briefings Bioinform. 23 (5) (2022)
Yanping Zeng, Xuhua Yan, Zhenlan Liang, Ruiqing Zheng, Min Li
MKG: a mutual information based method to infer single cell gene regulatory network. BIBM (2021)
Zhenlan Liang, Min Li, Ruiqing Zheng, Yu Tian, Xuhua Yan, Jin Chen, Fang-Xiang Wu, Jianxin Wang
SSRE: Cell Type Detection Based on Sparse Subspace Representation and Similarity Enhancement. Genom. Proteom. Bioinform. 19 (2) (2021)
Zhenlan Liang, Ruiqing Zheng, Siqi Chen, Xuhua Yan, Min Li
DeepCI: a deep learning based clustering method for single cell RNA-seq data. BIBM (2021)