Xingjie Shi

Publication Activity (10 Years)

Years Active: 2009-2023
Publications (10 Years): 11

Top Topics

Drosophila Melanogaster

Convex Loss Functions

Gene Expression

Empirical Bayes

Top Venues

Briefings Bioinform.

J. Comput. Graph. Stat.

Publications

Xingjie Shi, Yutong Zhu
Establishment and Research of a Janus SbBiSi2 Monolayer Structure Model. ICNC-FSKD (2023)
Xiao Zhang, Xingjie Shi, Yiming Liu, Xu Liu, Shuangge Ma
A General Framework for Identifying Hierarchical Interactions and Its Application to Genomics Data. J. Comput. Graph. Stat. 32 (3) (2023)
Qing Cheng, Tingting Qiu, Xiaoran Chai, Baoluo Sun, Yingcun Xia, Xingjie Shi, Jin Liu
MR-Corr2: a two-sample Mendelian randomization method that accounts for correlated horizontal pleiotropy using correlated instrumental variants. Bioinform. 38 (2) (2022)
Yi Yang, Xingjie Shi, Wei Liu, Qiuzhong Zhou, Mai Chan Lau, Jeffrey Chun Tatt Lim, Lei Sun, Cedric Chuan Young Ng, Joe Yeong, Jin Liu
SC-MEB: spatial clustering with hidden Markov random field using empirical Bayes. Briefings Bioinform. 23 (1) (2022)
Xu Liao, Xiaoran Chai, Xingjie Shi, Lin S. Chen, Jin Liu
The statistical practice of the GTEx Project: from single to multiple tissues. Quant. Biol. 9 (1) (2021)
Yi Yang, Xingjie Shi, Yuling Jiao, Jian Huang, Min Chen, Xiang Zhou, Lei Sun, Xinyi Lin, Can Yang, Jin Liu
CoMM-S2: a collaborative mixed model using summary statistics in transcriptome-wide association studies. Bioinform. 36 (7) (2020)
Xingjie Shi, Yuling Jiao, Yi Yang, Ching-Yu Cheng, Can Yang, Xinyi Lin, Jin Liu
VIMCO: variational inference for multiple correlated outcomes in genome-wide association studies. Bioinform. 35 (19) (2019)
Xingjie Shi, Yuan Huang, Jian Huang, Shuangge Ma
A Forward and Backward Stagewise algorithm for nonconvex loss functions with adaptive Lasso. Comput. Stat. Data Anal. 124 (2018)
Xingjie Shi, Huangdi Yi, Shuangge Ma
Measures for the degree of overlap of gene signatures and applications to TCGA. Briefings Bioinform. 16 (5) (2015)
Xingjie Shi, Qing Zhao, Jian Huang, Yang Xie, Shuangge Ma
Deciphering the associations between gene expression and copy number alteration using a sparse double Laplacian shrinkage approach. Bioinform. 31 (24) (2015)
Qing Zhao, Xingjie Shi, Yang Xie, Jian Huang, Ben-Chang Shia, Shuangge Ma
Combining multidimensional genomic measurements for predicting cancer prognosis: observations from TCGA. Briefings Bioinform. 16 (2) (2015)
Xingjie Shi, Shihao Shen, Jin Liu, Jian Huang, Yong Zhou, Shuangge Ma
Similarity of markers identified from cancer gene expression studies: observations from GEO. Briefings Bioinform. 15 (5) (2014)
Xingjie Shi, Yang Yin, Yanmin Ma
Commodity Cache Management for Storage Server. GCC (2009)