Xiaodan Fan

Publication Activity (10 Years)

Years Active: 2003-2023
Publications (10 Years): 22

Top Topics

Gene Expression

Similar Patterns

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Briefings Bioinform.

Publications

Jie Hu, Zirui Chen, Wenwei Lin, Xiaodan Fan
Bayesian detection of event spreading pattern from multivariate binary time series. Commun. Stat. Simul. Comput. 52 (4) (2023)
Ran Liu, Ye-Fan Hu, Jin Du, Bao-Zhong Zhang, Thomas Yau, Xiaodan Fan, Jian-Dong Huang
Family-Specific Training Improves Linear B Cell Epitope Prediction for Emerging Viruses. IEEE ACM Trans. Comput. Biol. Bioinform. 20 (6) (2023)
Ran Liu, Ye-Fan Hu, Jian-Dong Huang, Xiaodan Fan
A Bayesian approach to estimate MHC-peptide binding threshold. Briefings Bioinform. 24 (4) (2023)
Yetian Fan, April S. Chan, Jun Zhu, Suet Yi Leung, Xiaodan Fan
A Bayesian model for identifying cancer subtypes from paired methylation profiles. Briefings Bioinform. 24 (1) (2023)
Maolin Pan, Minggao Gu, Xianyi Wu, Xiaodan Fan
Globally and symmetrically identified Bayesian multinomial probit model. Stat. Comput. 33 (3) (2023)
Jin Du, Chaojie Wang, Lijun Wang, Shanjun Mao, Bencong Zhu, Zheng Li, Xiaodan Fan
Automatic block-wise genotype-phenotype association detection based on hidden Markov model. BMC Bioinform. 24 (1) (2023)
Hangjin Jiang, Han Li, Wing Hung Wong, Xiaodan Fan
Revealing Free Energy Landscape From MD Data via Conditional Angle Partition Tree. IEEE ACM Trans. Comput. Biol. Bioinform. 20 (2) (2023)
Chaojie Wang, Jin Du, Xiaodan Fan
High-dimensional correlation matrix estimation for general continuous data with Bagging technique. Mach. Learn. 111 (8) (2022)
Zutan Li, Hangjin Jiang, Lingpeng Kong, Yuanyuan Chen, Kun Lang, Xiaodan Fan, Liangyun Zhang, Cong Pian
Deep6mA: A deep learning framework for exploring similar patterns in DNA N6-methyladenine sites across different species. PLoS Comput. Biol. 17 (2) (2021)
Shanjun Mao, Xiaodan Fan, Jie Hu
Correlation for tree-shaped datasets and its Bayesian estimation. Comput. Stat. Data Anal. 164 (2021)
Jiali Yang, Kun Lang, Guang-Le Zhang, Xiaodan Fan, Yuanyuan Chen, Cong Pian
SOMM4mC: a second-order Markov model for DNA N4-methylcytosine site prediction in six species. Bioinform. 36 (14) (2020)
Cong Pian, Guang-Le Zhang, Libin Gao, Xiaodan Fan, Fei Li
miR+Pathway: the integration and visualization of miRNA and KEGG pathways. Briefings Bioinform. 21 (2) (2020)
Lijun Wang, Yanting Zhu, Jue Shi, Xiaodan Fan
Appearance-free Tripartite Matching for Multiple Object Tracking. CoRR (2020)
Zhen Zhang, Jin Du, Qingchun Meng, Xiaoxia Rong, Xiaodan Fan
The Spread of Information in Virtual Communities. Complex. 2020 (2020)
Jie Hu, Huihui Qin, Xiaodan Fan
Can ODE gene regulatory models neglect time lag or measurement scaling? Bioinform. 36 (13) (2020)
Cong Pian, Guang-Le Zhang, Fei Li, Xiaodan Fan
MM-6mAPred: identifying DNA N6-methyladenine sites based on Markov model. Bioinform. 36 (2) (2020)
Xiaodan Fan, Xinglai Ji, Rui Jiang
Guest Editorial for Special Section on the Sixth National Conference on Bioinformatics and System Biology of China. IEEE ACM Trans. Comput. Biol. Bioinform. 15 (4) (2018)
Qing Zhang, Xiaodan Fan, Yejun Wang, Ming-an Sun, Jianlin Shao, Dianjing Guo
BPP: a sequence-based algorithm for branch point prediction. Bioinform. 33 (20) (2017)
Linghao Shen, Jun Zhu, Shuo-Yen Robert Li, Xiaodan Fan
Detect differentially methylated regions using non-homogeneous hidden Markov model for methylation array data. Bioinform. 33 (23) (2017)
Yunchuan Kong, Xiaodan Fan
A Bayesian Method for Joint Clustering of Vectorial Data and Network Data. CoRR (2017)
Shudong Wang, Shanqiang Zhang, Shanshan Li, Xinzeng Wang, Sicheng He, Yan Zhao, Xiaodan Fan, Fayou Yuan, Xinjie Zhu, Yun Jiang
Analysis of SNP Network Structure Based on Mutual Information of Breast Cancer Susceptibility Genes. BIC-TA (2) (2016)
Guozhi Jiang, Claudia H. Tam, Andrea O. Y. Luk, Alice P. S. Kong, Wing-Yee So, Juliana C. N. Chan, Ronald C. W. Ma, Xiaodan Fan
Variable selection and prediction of clinical outcome with multiply-imputed data via Bayesian model averaging. BIBM (2016)
Han Li, Chun Li, Jie Hu, Xiaodan Fan
A Resampling Based Clustering Algorithm for Replicated Gene Expression Data. IEEE ACM Trans. Comput. Biol. Bioinform. 12 (6) (2015)
Guozhi Jiang, Eric S. Lau, Ying Wang, Andrea O. Y. Luk, Claudia H. Tam, Janice S. Ho, Vincent K. Lam, Heung M. Lee, Xiaodan Fan, Wing-Yee So, Juliana C. Chan, Ronald C. Ma
Development of Prediction Models under Multiple Imputation for Coronary Heart Disease in Type 2 Diabetes Mellitus. BIOINFORMATICS (2013)
Jin Xu, Qiwei Li, Victor O. K. Li, Shuo-Yen Robert Li, Xiaodan Fan
Improved short adjacent repeat identification using three evolutionary Monte Carlo schemes. Int. J. Data Min. Bioinform. 8 (4) (2013)
Jin Xu, Albert Y. S. Lam, Victor O. K. Li, Qiwei Li, Xiaodan Fan
Short adjacent repeat identification based on Chemical Reaction Optimization. IEEE Congress on Evolutionary Computation (2012)
Qiwei Li, Xiaodan Fan, Tong Liang, Shuo-Yen Robert Li
An MCMC algorithm for detecting short adjacent repeats shared by multiple sequences. Bioinform. 27 (13) (2011)
Qiwei Li, Tong Liang, Shuo-Yen Robert Li, Xiaodan Fan
Bayesian Approach for Identifying Short Adjacent Repeats in Multiple Sequences. BIOCOMP (2010)
Jin Xu, Qiwei Li, Xiaodan Fan, Victor O. K. Li, Shuo-Yen Robert Li
An Evolutionary Monte Carlo algorithm for identifying short adjacent repeats in multiple sequences. BIBM (2010)
Xiang Wan, Can Yang, Qiang Yang, Hong Xue, Xiaodan Fan, Nelson L. S. Tang, Weichuan Yu
BOOST: A fast approach to detecting gene-gene interactions in genome-wide case-control studies CoRR (2010)
Qiwei Li, Tong Liang, Xiaodan Fan, Chunhui Xu, Weichang Yu, Shuo-Yen Robert Li
An automatic procedure to search highly repetitive sequences in genome as fluorescence in situ hybridization probes and its application on Brachypodium distachyon. BIBM (2010)
Xiaodan Fan, Jun Zhu, Eric E. Schadt, Jun S. Liu
Statistical power of phylo-HMM for evolutionarily conserved element detection. BMC Bioinform. 8 (2007)
Ying-Fei Sun, Xiaodan Fan, Yan-Da Li
Identifying splicing sites in eukaryotic RNA: support vector machine approach. Comput. Biol. Medicine 33 (1) (2003)