Vincent Gardeux

ORCID

Publication Activity (10 Years)

Years Active: 2009-2020
Publications (10 Years): 8

Top Venues

Bioinform.

J. Am. Medical Informatics Assoc.

J. Biomed. Informatics

ESANN

University of Paris-Est, France (PHD)

Education History

University of Paris-Est, France

PHD

Publications

Fabrice P. A. David, Maria Litovchenko, Bart Deplancke, Vincent Gardeux
ASAP 2020 update: an open, scalable and interactive web-based portal for (single-cell) omics analyses. Nucleic Acids Res. 48 (Webserver-Issue) (2020)
Vincent Gardeux, Joanne Berghout, Ikbel Achour, A. Grant Schissler, Qike Li, Colleen Kenost, Jianrong Li, Yuan Shang, Anthony Bosco, Donald Saner, Marilyn J. Halonen, Daniel Jackson, Haiquan Li, Fernando D. Martinez, Yves A. Lussier
A genome-by-environment interaction classifier for precision medicine: personal transcriptome response to rhinovirus identifies children prone to asthma exacerbations. J. Am. Medical Informatics Assoc. 24 (6) (2017)
Vincent Gardeux, Mahamed G. H. Omran, Rachid Chelouah, Patrick Siarry, Fred W. Glover
Adaptive pattern search for large-scale optimization. Appl. Intell. 47 (2) (2017)
Qike Li, A. Grant Schissler, Vincent Gardeux, Joanne Berghout, Ikbel Achour, Colleen Kenost, Haiquan Li, Hao Helen Zhang, Yves A. Lussier
kMEn: Analyzing noisy and bidirectional transcriptional pathway responses in single subjects. J. Biomed. Informatics 66 (2017)
Vincent Gardeux, Fabrice P. A. David, Adrian Shajkofci, Petra C. Schwalie, Bart Deplancke
ASAP: a web-based platform for the analysis and interactive visualization of single-cell RNA-seq data. Bioinform. 33 (19) (2017)
Haiquan Li, Nima Pouladi, Ikbel Achour, Vincent Gardeux, Jianrong Li, Qike Li, Hao Helen Zhang, Fernando D. Martinez, Joe G. N. 'Skip' Garcia, Yves A. Lussier
eQTL networks unveil enriched mRNA master integrators downstream of complex disease-associated SNPs. J. Biomed. Informatics 58 (2015)
Vincent Gardeux, Anthony Bosco, Jianrong Li, Marilyn J. Halonen, Daniel Jackson, Fernando D. Martinez, Yves A. Lussier
Towards a PBMC "virogram assay" for precision medicine: Concordance between ex vivo and in vivo viral infection transcriptomes. J. Biomed. Informatics 55 (2015)
A. Grant Schissler, Vincent Gardeux, Qike Li, Ikbel Achour, Haiquan Li, Walter W. Piegorsch, Yves A. Lussier
Dynamic changes of RNA-sequencing expression for precision medicine: N-of-1-pathways Mahalanobis distance within pathways of single subjects predicts breast cancer survival. Bioinform. 31 (12) (2015)
Young Ji Lee, Andrew D. Boyd, Jianrong Li, Vincent Gardeux, Colleen Kenost, Donald Saner, Haiquan Li, Ivo L. Abraham, Jerry A. Krishnan, Yves A. Lussier
COPD Hospitalization Risk Increased with Distinct Patterns of Multiple Systems Comorbidities Unveiled by Network Modeling. AMIA (2014)
Vincent Gardeux, Ikbel Achour, Jianrong Li, Mark Maienschein-Cline, Haiquan Li, Lorenzo L. Pesce, Gurunadh Parinandi, Neil Bahroos, Robert Winn, Ian T. Foster, Joe G. N. Garcia, Yves A. Lussier
' unveils personal deregulated mechanisms from a single pair of RNA-Seq samples: towards precision medicine. J. Am. Medical Informatics Assoc. 21 (6) (2014)
Mark Maienschein-Cline, Zhengdeng Lei, Vincent Gardeux, Taimur Abbasi, Roberto F. Machado, Victor Gordeuk, Ankit A. Desai, Santosh Saraf, Neil Bahroos, Yves A. Lussier
ARTS: automated randomization of multiple traits for study design. Bioinform. 30 (11) (2014)
Maria Fernanda B. Wanderley, Vincent Gardeux, René Natowicz, Antônio de Pádua Braga
GA-KDE-Bayes: an evolutionary wrapper method based on non-parametric density estimation applied to bioinformatics problems. ESANN (2013)
Andrew D. Boyd, Jianrong John Li, Mike D. Burton, Michael Jonen, Vincent Gardeux, Ikbel Achour, Roger Q. Luo, Ilir Zenku, Neil Bahroos, Stephen B. Brown, Terry Vanden Hoek, Yves A. Lussier
Research and applications: The discriminatory cost of ICD-10-CM transition between clinical specialties: metrics, case study, and mitigating tools. J. Am. Medical Informatics Assoc. 20 (4) (2013)
Stefan Bornhofen, Vincent Gardeux, Andréa Machizaud
From Swarm Art Toward Ecosystem Art. Int. J. Swarm Intell. Res. 3 (3) (2012)
Vincent Gardeux, Rachid Chelouah, Patrick Siarry, Fred W. Glover
EM323: a line search based algorithm for solving high-dimensional continuous non-linear optimization problems. Soft Comput. 15 (11) (2011)
Vincent Gardeux, Rachid Chelouah, Patrick Siarry, Fred W. Glover
Unidimensional Search for Solving Continuous High-Dimensional Optimization Problems. ISDA (2009)

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Publication Activity (10 Years)

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Vincent Gardeux