Ville Mustonen

Publication Activity (10 Years)

Years Active: 2012-2023
Publications (10 Years): 7

Top Topics

Evolutionary History

Cooperative Coevolution

Nucleotide Sequences

Top Venues

PLoS Comput. Biol.

Publications

Giovanni Strona, Corey J. A. Bradshaw, Pedro Cardoso, Nicholas Gotelli, Frédéric Guillaume, Federica Manca, Ville Mustonen, Luis Zaman
Time-travelling pathogens and their risk to ecological communities. PLoS Comput. Biol. 19 (7) (2023)
Dovydas Kiciatovas, Qingli Guo, Miika Kailas, Henri Pesonen, Jukka Corander, Samuel Kaski, Esa Pitkänen, Ville Mustonen
Identification of multiplicatively acting modulatory mutational signatures in cancer. BMC Bioinform. 23 (1) (2022)
Teemu Kuosmanen, Johannes Cairns, Robert Noble, Niko Beerenwinkel, Tommi Mononen, Ville Mustonen
Drug-induced resistance evolution necessitates less aggressive treatment. PLoS Comput. Biol. 17 (9) (2021)
Otto Pulkkinen, Prson Gautam, Ville Mustonen, Tero Aittokallio
Multiobjective optimization identifies cancer-selective combination therapies. PLoS Comput. Biol. 16 (12) (2020)
Moritz Gerstung, Clemency Jolly, Ignaty Leshchiner, Stefan C. Dentro, Santiago Gonzalez, Thomas J. Mitchell, Yulia Rubanova, Pavana Anur, Kaixian Yu, Maxime Tarabichi, Amit G. Deshwar, Jeff Wintersinger, Kortine Kleinheinz, Ignacio Vázquez-García, Kerstin Haase, Lara Jerman, Subhajit Sengupta, Geoff MacIntyre, Salem Malikic, Nilgun Donmez, Dimitri G. Livitz, Marek Cmero, Jonas Demeulemeester, Steven E. Schumacher, Yu Fan, Xiaotong Yao, Juhee Lee, Matthias Schlesner, Paul C. Boutros, David D. L. Bowtell, Hongtu Zhu, Gad Getz, Marcin Imielinski, Rameen Beroukhim, Süleyman Cenk Sahinalp, Yuan Ji, Martin Peifer, Florian Markowetz, Ville Mustonen, Ke Yuan, Wenyi Wang, Quaid D. Morris, David J. Adams, Peter J. Campbell, Shaolong Cao, Elizabeth L. Christie, Yupeng Cun, Kevin J. Dawson, Ruben M. Drews, Roland Eils, Matthew Fittall, Dale W. Garsed, Gavin Ha, Henry Lee-Six, Iñigo Martincorena, Layla Oesper, Myron Peto, Benjamin J. Raphael, Daniel T. Rosebrock, Adriana Salcedo, Ruian Shi, Seung Jun Shin, Oliver Spiro, Lincoln D. Stein, Shankar Vembu, David A. Wheeler, Tsun-Po Yang, Paul T. Spellman, David C. Wedge, Peter Van Loo
The evolutionary history of 2,658 cancers. Nat. 578 (7793) (2020)
Jani V. Anttila, Mikhail Shubin, Johannes Cairns, Florian Borse, Qingli Guo, Tommi Mononen, Ignacio Vázquez-García, Otto Pulkkinen, Ville Mustonen
Contrasting the impact of cytotoxic and cytostatic drug therapies on tumour progression. PLoS Comput. Biol. 15 (11) (2019)
Danesh Moradigaravand, Martin Palm, Anne Farewell, Ville Mustonen, Jonas Warringer, Leopold Parts
Prediction of antibiotic resistance in Escherichia coli from large-scale pan-genome data. PLoS Comput. Biol. 14 (12) (2018)
Christopher J. R. Illingworth, Andrej Fischer, Ville Mustonen
Identifying Selection in the Within-Host Evolution of Influenza Using Viral Sequence Data. PLoS Comput. Biol. 10 (7) (2014)
Christopher J. R. Illingworth, Ville Mustonen
A method to infer positive selection from marker dynamics in an asexual population. Bioinform. 28 (6) (2012)
Michal Kolár, Jörn Meier, Ville Mustonen, Michael Lässig, Johannes Berg
GraphAlignment: Bayesian pairwise alignment of biological networks. BMC Syst. Biol. 6 (2012)