Tzu-Hao Chang

Publication Activity (10 Years)

Years Active: 2006-2022
Publications (10 Years): 8

Top Topics

Phylogenetic Analysis

Genome Sequencing

Amino Acid Composition

Gene Expression Profiling

Top Venues

Nucleic Acids Res.

Comput. Biol. Chem.

Publications

Jhih-Hua Jhong, Lantian Yao, Yuxuan Pang, Zhongyan Li, Chia-Ru Chung, Rulan Wang, Shangfu Li, Wenshuo Li, Mengqi Luo, Renfei Ma, Yuqi Huang, Xiaoning Zhu, Jiahong Zhang, Hexiang Feng, Qifan Cheng, Chunxuan Wang, Kun Xi, Li-Ching Wu, Tzu-Hao Chang, Jorng-Tzong Horng, Lizhe Zhu, Ying-Chih Chiang, Zhuo Wang, Tzong-Yi Lee
dbAMP 2.0: updated resource for antimicrobial peptides with an enhanced scanning method for genomic and proteomic data. Nucleic Acids Res. 50 (D1) (2022)
Yi-Gang Chen, Lantian Yao, Yun Tang, Jhih-Hua Jhong, Jingting Wan, Jingyue Chang, Shi-Dong Cui, Yijun Luo, Xiao-Xuan Cai, Wenshuo Li, Qi Chen, Hsi-Yuan Huang, Zhuo Wang, Weiming Chen, Tzu-Hao Chang, Feng-Xiang Wei, Tzong-Yi Lee, Hsien-Da Huang
CircNet 2.0: an updated database for exploring circular RNA regulatory networks in cancers. Nucleic Acids Res. 50 (D1) (2022)
Tzong-Yi Lee, Kai-Yao Huang, Cheng-Hsiang Chuang, Cheng-Yang Lee, Tzu-Hao Chang
Incorporating deep learning and multi-omics autoencoding for analysis of lung adenocarcinoma prognostication. Comput. Biol. Chem. 87 (2020)
Shun-Long Weng, Kai-Yao Huang, Julia Tzu-Ya Weng, Fang-Yu Hung, Tzu-Hao Chang, Tzong-Yi Lee
Genome-wide discovery of viral microRNAs based on phylogenetic analysis and structural evolution of various human papillomavirus subtypes. Briefings Bioinform. 19 (6) (2018)
Kai-Yao Huang, Tzu-Hao Chang, Jhih-Hua Jhong, Yu-Hsiang Chi, Wen-Chi Li, Chien-Lung Chan, K. Robert Lai, Tzong-Yi Lee
Identification of natural antimicrobial peptides from bacteria through metagenomic and metatranscriptomic analysis of high-throughput transcriptome data of Taiwanese oolong teas. BMC Syst. Biol. 11 (S-7) (2017)
Shun-Long Weng, Kai-Yao Huang, Fergie Joanda Kaunang, Chien-Hsun Huang, Hui-Ju Kao, Tzu-Hao Chang, Hsin-Yao Wang, Jang-Jih Lu, Tzong-Yi Lee
Investigation and identification of protein carbonylation sites based on position-specific amino acid composition and physicochemical features. BMC Bioinform. 18 (S-3) (2017)
Usman Iqbal, Tzu-Hao Chang, Phung Anh Nguyen, Syed Abdul Shabbir, Hsuan-Chia Yang, Chih-Wei Huang, Suleman Atique, Wei-Chung Yang, Max Moldovan, Wen-Shan Jian, Min-Huei Hsu, Yun Yen, Yu-Chuan (Jack) Li
Benzodiazepines use and breast cancer risk: A population-based study and gene expression profiling evidence. J. Biomed. Informatics 74 (2017)
Van-Minh Bui, Shun-Long Weng, Cheng-Tsung Lu, Tzu-Hao Chang, Julia Tzu-Ya Weng, Tzong-Yi Lee
-sulfenylation sites. BMC Genom. 17 (S-1) (2016)
Van-Nui Nguyen, Kai-Yao Huang, Chien-Hsun Huang, Tzu-Hao Chang, Neil Arvin Bretaña, K. Robert Lai, Julia Weng, Tzong-Yi Lee
Characterization and identification of ubiquitin conjugation sites with E3 ligase recognition specificities. BMC Bioinform. 16 (S-1) (2015)
Kai-Yao Huang, Tzong-Yi Lee, Yu-Chuan Teng, Tzu-Hao Chang
ViralmiR: a support-vector-machine-based method for predicting viral microRNA precursors. BMC Bioinform. 16 (S-1) (2015)
Chih-Min Chiu, Feng-Mao Lin, Tzu-Hao Chang, Wei-Chih Huang, Chao Liang, Ting Yang, Wei-Yun Wu, Tzu-Ling Yang, Shun-Long Weng, Hsien-Da Huang
Clinical detection of human probiotics and human pathogenic bacteria by using a novel high-throughput platform based on next generation sequencing. J. Clin. Bioinform. 4 (2014)
Tzong-Yi Lee, Cheng-Wei Chang, Cheng-Tsung Lu, Tzu-Hsiu Cheng, Tzu-Hao Chang
Identification and characterization of lysine-methylated sites on histones and non-histone proteins. Comput. Biol. Chem. 50 (2014)
Sheng-Da Hsu, Yu-Ting Tseng, Sirjana Shrestha, Yu-Ling Lin, Anas Khaleel, Chih-Hung Chou, Chao-Fang Chu, Hsi-Yuan Huang, Ching-Min Lin, Shu-Yi Ho, Ting-Yan Jian, Feng-Mao Lin, Tzu-Hao Chang, Shun-Long Weng, Kuang-Wen Liao, I-En Liao, Chun-Chi Liu, Hsien-Da Huang
miRTarBase update 2014: an information resource for experimentally validated miRNA-target interactions. Nucleic Acids Res. 42 (Database-Issue) (2014)
Chih-Hung Chou, Feng-Mao Lin, Min-Te Chou, Sheng-Da Hsu, Tzu-Hao Chang, Shun-Long Weng, Sirjana Shrestha, Chiung-Chih Hsiao, Jui-Hung Hung, Hsien-Da Huang
A computational approach for identifying microRNA-target interactions using high-throughput CLIP and PAR-CLIP sequencing. BMC Genom. 14 (S-1) (2013)
Tzu-Hao Chang, Hsi-Yuan Huang, Justin Bo-Kai Hsu, Shun-Long Weng, Jorng-Tzong Horng, Hsien-Da Huang
An enhanced computational platform for investigating the roles of regulatory RNA and for identifying functional RNA motifs. BMC Bioinform. 14 (S-2) (2013)
Tzu-Hao Chang, Li-Ching Wu, Tzong-Yi Lee, Shu-Pin Chen, Hsien-Da Huang, Jorng-Tzong Horng
EuLoc: a web-server for accurately predict protein subcellular localization in eukaryotes by incorporating various features of sequence segments into the general form of Chou's PseAAC. J. Comput. Aided Mol. Des. 27 (1) (2013)
Kai-Yao Huang, Cheng-Tsung Lu, Neil Arvin Bretaña, Tzong-Yi Lee, Tzu-Hao Chang
ViralPhos: incorporating a recursively statistical method to predict phosphorylation sites on virus proteins. BMC Bioinform. 14 (S-16) (2013)
Chih-Min Chiu, Feng-Mao Lin, Tzu-Hao Chang, Wei-Chih Huang, Chao Liang, Wei-Yun Wu, Tzu-Ling Yang, Shun-Long Weng, Hsien-Da Huang
Clinical detection of human probiotics and human pathogenic bacteria by using a novel high-throughput platform based on next generation sequencing. IWBBIO (2013)
Wei-Chih Huang, Feng-Mao Lin, Tzu-Hao Chang, Kuang-Wen Liao, Hsien-Da Huang
Identifying cancer highly-expressed membrane receptors for targeted drug delivery. Int. J. Bioinform. Res. Appl. 8 (3/4) (2012)
Tzong-Yi Lee, Wen-Chi Chang, Justin Bo-Kai Hsu, Tzu-Hao Chang, Dray-Ming Shien
GPMiner: an integrated system for mining combinatorial cis-regulatory elements in mammalian gene group. BMC Genom. 13 (S-1) (2012)
Tzu-Hao Chang, Li-Ching Wu, Yu-Ting Chen, Hsien-Da Huang, Baw-Jhiune Liu, Kuang-Fu Cheng, Jorng-Tzong Horng
Characterization and prediction of mRNA polyadenylation sites in human genes. Medical Biol. Eng. Comput. 49 (4) (2011)
Tzu-Hao Chang, Li-Ching Wu, Jun-Hong Lin, Hsien-Da Huang, Baw-Jhiune Liu, Kuang-Fu Cheng, Jorng-Tzong Horng
Prediction of small non-coding RNA in bacterial genomes using support vector machines. Expert Syst. Appl. 37 (8) (2010)
Tzu-Hao Chang, Li-Ching Wu, Chi-Ta Yeh, Cheng-Wei Chang, Baw-Jhiune Liu, Hsien-Da Huang, Jorng-Tzong Horng
RiboSW . BIBE (2009)
Tzu-Hao Chang, Jorng-Tzong Horng, Hsien-Da Huang
RNALogo: a new approach to display structural RNA alignment. Nucleic Acids Res. 36 (Web-Server-Issue) (2008)
Tzu-Hao Chang, Hsien-Da Huang, Tzu-Neng Chuang, Dray-Ming Shien, Jorng-Tzong Horng
RNAMST: efficient and flexible approach for identifying RNA structural homologs. Nucleic Acids Res. 34 (Web-Server-Issue) (2006)