Timothy I. Shaw

Publication Activity (10 Years)

Years Active: 2010-2024
Publications (10 Years): 2

Top Topics

Fingerprint Classification

Top Venues

PLoS Comput. Biol.

Publications

Xiang Liu, Nancy Gillis, Chang Jiang, Anthony McCofie, Timothy I. Shaw, Aik Choon Tan, Bo Zhao, Lixin Wan, Derek R. Duckett, Mingxiang Teng
An Epigenomic fingerprint of human cancers by landscape interrogation of super enhancers at the constituent level. PLoS Comput. Biol. 20 (2) (2024)
Alyssa N. Obermayer, Darwin Chang, Gabrielle Nobles, Mingxiang Teng, Aik Choon Tan, Xuefeng Wang, Y. Ann Chen, Steven Eschrich, Paulo C. Rodriguez, G. Daniel Grass, Soheil Meshinchi, Ahmad Tarhini, Dung-tsa Chen, Timothy I. Shaw
PATH-SURVEYOR: pathway level survival enquiry for immuno-oncology and drug repurposing. BMC Bioinform. 24 (1) (2023)
Timothy I. Shaw, Ming Zhang
HIV N-linked glycosylation site analyzer and its further usage in anchored alignment. Nucleic Acids Res. 41 (Webserver-Issue) (2013)
Timothy I. Shaw, Zheng Ruan, Travis C. Glenn, Liang Liu
STRAW: Species TRee Analysis Web server. Nucleic Acids Res. 41 (Webserver-Issue) (2013)
Yingfeng Wang, Amir Manzour, Pooya Shareghi, Timothy I. Shaw, Ying-Wai Li, Russell L. Malmberg, Liming Cai
Stable stem enabled Shannon entropies distinguish non-coding RNAs from random backgrounds. BMC Bioinform. 13 (S-5) (2012)
Timothy I. Shaw, Amir Manzour, Yingfeng Wang, Russell L. Malmberg, Liming Cai
Analyzing Modular RNA Structure reveals Low Global Structural Entropy in microRNA Sequence. J. Bioinform. Comput. Biol. 9 (2) (2011)
Yingfeng Wang, Amir Manzour, Pooya Shareghi, Timothy I. Shaw, Ying-Wai Li, Russell L. Malmberg, Liming Cai
Stable stem enabled shannon entropies distinguish non-coding RNAs from random backgrounds. ICCABS (2011)
Russell L. Malmberg, Timothy I. Shaw, Liming Cai
RNApasta: a tool for analysis of RNA structural alignments. Int. J. Bioinform. Res. Appl. 6 (6) (2010)