Timothy C. Germann

Publication Activity (10 Years)

Years Active: 1999-2024
Publications (10 Years): 16

Top Topics

Machine Learning

Automated Discovery

Top Venues

Healthcare AI and COVID-19 Workshop

Comput. Phys. Commun.

J. Open Source Softw.

Publications

Axel Browne, David Butts, Edgar Jaramillo Rodriguez, Nidhi Parikh, Geoffrey Fairchild, Zach Needell, Cristian Poliziani, Tom Wenzel, Timothy C. Germann, Sara Y. Del Valle
Evaluating disease surveillance strategies for early outbreak detection in contact networks with varying community structure. Soc. Networks 79 (2024)
Aleksandra Pachalieva, Robert S. Pavel, Javier E. Santos, Abdourahmane Diaw, Nicholas Lubbers, Mohammed Mehana, Jeffrey R. Haack, Hari S. Viswanathan, Daniel Livescu, Timothy C. Germann, Christoph Junghans
GLUE Code: A framework handling communication and interfaces between scales. J. Open Source Softw. 7 (80) (2022)
Stuart R. Slattery, Samuel Temple Reeve, Christoph Junghans, Damien Lebrun-Grandié, Robert F. Bird, Guangye Chen, Shane Fogerty, Yuxing Qiu, Stephan Schulz, Aaron Scheinberg, Austin Isner, Kwitae Chong, Stan G. Moore, Timothy C. Germann, James F. Belak, Susan M. Mniszewski
Cabana: A Performance Portable Library for Particle-Based Simulations. J. Open Source Softw. 7 (72) (2022)
Jayaraman J. Thiagarajan, Rushil Anirudh, Peer-Timo Bremer, Timothy C. Germann, Sara Y. Del Valle, Frederick H. Streitz
Machine Learning-Powered Mitigation Policy Optimization in Epidemiological Models. Healthcare AI and COVID-19 Workshop (2022)
Rushil Anirudh, Jayaraman J. Thiagarajan, Peer-Timo Bremer, Timothy C. Germann, Sara Y. Del Valle, Frederick H. Streitz
Accurate Calibration of Agent-based Epidemiological Models with Neural Network Surrogates. Healthcare AI and COVID-19 Workshop (2022)
Thomas M. Evans, Andrew R. Siegel, Erik W. Draeger, Jack Deslippe, Marianne M. Francois, Timothy C. Germann, William E. Hart, Daniel F. Martin
A survey of software implementations used by application codes in the Exascale Computing Project. Int. J. High Perform. Comput. Appl. 36 (1) (2022)
Satish Karra, Mohammed Mehana, Nicholas Lubbers, Yu Chen, Abdourahmane Diaw, Javier E. Santos, Aleksandra Pachalieva, Robert S. Pavel, Jeffrey R. Haack, Michael McKerns, Christoph Junghans, Qinjun Kang, Daniel Livescu, Timothy C. Germann, Hari S. Viswanathan
Predictive Scale-Bridging Simulations through Active Learning. CoRR (2022)
Timothy C. Germann
Co-design in the Exascale Computing Project. Int. J. High Perform. Comput. Appl. 35 (6) (2021)
Kun Wang, Yu Chen, Mohammed Mehana, Nicholas Lubbers, Kane C. Bennett, Qinjun Kang, Hari S. Viswanathan, Timothy C. Germann
A physics-informed and hierarchically regularized data-driven model for predicting fluid flow through porous media. J. Comput. Phys. 443 (2021)
Anshu Dubey, Lois Curfman McInnes, Rajeev Thakur, Erik W. Draeger, Thomas M. Evans, Timothy C. Germann, William E. Hart
Performance Portability in the Exascale Computing Project: Exploration Through a Panel Series. Comput. Sci. Eng. 23 (5) (2021)
Rushil Anirudh, Jayaraman J. Thiagarajan, Peer-Timo Bremer, Timothy C. Germann, Sara Y. Del Valle, Frederick H. Streitz
Accurate Calibration of Agent-based Epidemiological Models with Neural Network Surrogates. CoRR (2020)
Jayaraman J. Thiagarajan, Peer-Timo Bremer, Rushil Anirudh, Timothy C. Germann, Sara Y. Del Valle, Frederick H. Streitz
Machine Learning-Powered Mitigation Policy Optimization in Epidemiological Models. CoRR (2020)
Justin S. Smith, Benjamin Nebgen, Nithin Mathew, Jie Chen, Nicholas Lubbers, Leonid Burakovsky, Sergei Tretiak, Hai Ah Nam, Timothy C. Germann, Saryu Fensin, Kipton Barros
Automated discovery of a robust interatomic potential for aluminum. CoRR (2020)
Nicolas Bock, Christian F. A. Negre, Susan M. Mniszewski, Jamaludin Mohd-Yusof, Bálint Aradi, Jean-Luc Fattebert, Daniel Osei-Kuffuor, Timothy C. Germann, Anders M. N. Niklasson
The basic matrix library (BML) for quantum chemistry. J. Supercomput. 74 (11) (2018)
Dominic Roehm, Robert S. Pavel, Kipton Barros, Bertrand Rouet-Leduc, Allen L. McPherson, Timothy C. Germann, Christoph Junghans
KAS). Comput. Phys. Commun. 192 (2015)
Robert S. Pavel, Allen L. McPherson, Timothy C. Germann, Christoph Junghans
Database assisted distribution to improve fault tolerance for multiphysics applications. Co-HPC@SC (2015)
Bertrand Rouet-Leduc, Kipton Barros, Emmanuel Cieren, Venmugil Elango, Christoph Junghans, Turab Lookman, Jamaludin Mohd-Yusof, Robert S. Pavel, Axel Y. Rivera, Dominic Roehm, Allen L. McPherson, Timothy C. Germann
Spatial adaptive sampling in multiscale simulation. Comput. Phys. Commun. 185 (7) (2014)
Timothy C. Germann, Kai Kadau, Sriram Swaminarayan
369 Tflop/s molecular dynamics simulations on the petaflop hybrid supercomputer 'Roadrunner'. Concurr. Comput. Pract. Exp. 21 (17) (2009)
Sriram Swaminarayan, Kai Kadau, Timothy C. Germann, Gordon C. Fossum
369 Tflop/s molecular dynamics simulations on the Roadrunner general-purpose heterogeneous supercomputer. SC (2008)
Bronis R. de Supinski, Martin Schulz, Vasily V. Bulatov, William H. Cabot, Bor Chan, Andrew W. Cook, Erik W. Draeger, James N. Glosli, Jeffrey A. Greenough, Keith W. Henderson, Alison Kubota, Steve Louis, Brian J. Miller, Mehul V. Patel, Thomas E. Spelce, Frederick H. Streitz, Peter L. Williams, Robert K. Yates, Andy Yoo, George Almási, Gyan Bhanot, Alan Gara, John A. Gunnels, Manish Gupta, José E. Moreira, James C. Sexton, Robert Walkup, Charles Archer, François Gygi, Timothy C. Germann, Kai Kadau, Peter S. Lomdahl, Charles A. Rendleman, Michael L. Welcome, William McLendon, Bruce Hendrickson, Franz Franchetti, Stefan Kral, Juergen Lorenz, Christoph W. Überhuber, Edmond Chow, Ümit V. Çatalyürek
BlueGene/L applications: Parallelism On a Massive Scale. Int. J. High Perform. Comput. Appl. 22 (1) (2008)
Timothy C. Germann, Peter S. Lomdahl
Recent advances in large-scale atomistic materials simulations. Comput. Sci. Eng. 1 (2) (1999)