Thuy-Diem Nguyen

Publication Activity (10 Years)

Years Active: 2011-2015
Publications (10 Years): 1

Top Topics

Hierarchical Clustering Algorithm

Memory Efficient

Ranking Algorithm

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Thuy-Diem Nguyen, Bertil Schmidt, Zejun Zheng, Chee-Keong Kwoh
Efficient and Accurate OTU Clustering with GPU-Based Sequence Alignment and Dynamic Dendrogram Cutting. IEEE ACM Trans. Comput. Biol. Bioinform. 12 (5) (2015)
Thuy-Diem Nguyen, Bertil Schmidt, Chee-Keong Kwoh
Fast dendrogram-based OTU clustering using sequence embedding. BCB (2014)
Thuy-Diem Nguyen, Bertil Schmidt, Chee Keong Kwoh
SparseHC: A Memory-efficient Online Hierarchical Clustering Algorithm. ICCS (2014)
Chinh Tran To Su, Thuy-Diem Nguyen, Jie Zheng, Chee Keong Kwoh
IFACEwat: the interfacial water-implemented re-ranking algorithm to improve the discrimination of near native structures for protein rigid docking. BMC Bioinform. 15 (S-16) (2014)
Zejun Zheng, Thuy-Diem Nguyen, Bertil Schmidt
CRiSPy-CUDA: Computing Species Richness in 16S rRNA Pyrosequencing Datasets with CUDA. PRIB (2011)