Thomas G. Doak

Publication Activity (10 Years)

Years Active: 2009-2020
Publications (10 Years): 2

Top Topics

Clustering Gene Expression Data

Limited Resources

Top Venues

Pacific Symposium on Biocomputing

Publications

Weibo Zheng, Jing Chen, Thomas G. Doak, Weibo Song, Ying Yan
ADFinder: accurate detection of programmed DNA elimination using NGS high-throughput sequencing data. Bioinform. 36 (12) (2020)
Carrie L. Ganote, Sheri A. Sanders, Bhavya Nalagampalli Papudeshi, Philip D. Blood, Thomas G. Doak
A Voice for Bioinformatics. PEARC (2017)
Le-Shin Wu, Carrie L. Ganote, Thomas G. Doak, William K. Barnett, Keithanne Mockaitis, Craig A. Stewart
Cyberinfrastructure resources enabling creation of the loblolly pine reference transcriptome. XSEDE (2015)
Richard D. LeDuc, Thomas G. Doak, Le-Shin Wu, Philip D. Blood, Carrie L. Ganote, Matthew Vaughn
National Center for Genome Analysis support leverages XSEDE to support life science research. XSEDE (2013)
Abhinav Thota, Bernhard Haubold, Scott Michael, Thomas G. Doak, Sen Xu, Robert Henschel
Making campus bridging work for researchers: a case study with mlRho. XSEDE (2013)
Yu-Wei Wu, Mina Rho, Thomas G. Doak, Yuzhen Ye
Stitching gene fragments with a network matching algorithm improves gene assembly for metagenomics. Bioinform. 28 (18) (2012)
Quan Zhang, Thomas G. Doak, Yuzhen Ye
Artificial Functional Difference Between Microbial Communities Caused by Length Difference of Sequencing Reads. Pacific Symposium on Biocomputing (2012)
Neethu Shah, Haixu Tang, Thomas G. Doak, Yuzhen Ye
Comparing Bacterial Communities Inferred from 16s Rrna Gene Sequencing and Shotgun Metagenomics. Pacific Symposium on Biocomputing (2011)
Yuzhen Ye, Thomas G. Doak
A Parsimony Approach to Biological Pathway Reconstruction/Inference for Genomes and Metagenomes. PLoS Comput. Biol. 5 (8) (2009)