Stitching gene fragments with a network matching algorithm improves gene assembly for metagenomics.
Yu-Wei WuMina RhoThomas G. DoakYuzhen YePublished in: Bioinform. (2012)
Keyphrases
- matching algorithm
- interaction networks
- genomic sequences
- gene expression
- microarray
- template matching
- image matching
- matching process
- gene expression data
- matching strategy
- network model
- graph matching
- gene regulatory networks
- hausdorff distance
- matching scheme
- point matching
- object matching
- shape matching
- shape representation
- hidden markov models
- sequence alignment
- regulatory networks
- partial matching
- dna sequences
- chamfer matching