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Stephen Nayfach
ORCID
Publication Activity (10 Years)
Years Active: 2015-2023
Publications (10 Years): 6
Top Topics
Escherichia Coli
Sequence Data
Accurate Estimation
Gene Expression
Top Venues
Nucleic Acids Res.
PLoS Comput. Biol.
Bioinform.
Nat.
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Publications
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Antonio Pedro Camargo
,
Stephen Nayfach
,
I-Min A. Chen
,
Krishnaveni Palaniappan
,
Anna Ratner
,
Ken Chu
,
Stephan Ritter
,
T. B. K. Reddy
,
Supratim Mukherjee
,
Frederik Schulz
,
Lee Call
,
Russell Y. Neches
,
Tanja Woyke
,
Natalia N. Ivanova
,
Emiley A. Eloe-Fadrosh
,
Nikos Kyrpides
,
Simon Roux
IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
Nucleic Acids Res.
51 (D1) (2023)
Simon Roux
,
A. David Páez-Espino
,
I-Min A. Chen
,
Krishna Palaniappan
,
Anna Ratner
,
Ken Chu
,
T. B. K. Reddy
,
Stephen Nayfach
,
Frederik Schulz
,
Lee Call
,
Russell Y. Neches
,
Tanja Woyke
,
Natalia N. Ivanova
,
Emiley A. Eloe-Fadrosh
,
Nikos Kyrpides
IMG/VR v3: an integrated ecological and evolutionary framework for interrogating genomes of uncultivated viruses.
Nucleic Acids Res.
49 (Database-Issue) (2021)
Stephen Nayfach
,
Zhou Jason Shi
,
Rekha Seshadri
,
Katherine S. Pollard
,
Nikos Kyrpides
New insights from uncultivated genomes of the global human gut microbiome.
Nat.
568 (7753) (2019)
Patrick H. Bradley
,
Stephen Nayfach
,
Katherine S. Pollard
Phylogeny-corrected identification of microbial gene families relevant to human gut colonization.
PLoS Comput. Biol.
14 (8) (2018)
Stephen Nayfach
,
Patrick H. Bradley
,
Stacia K. Wyman
,
Timothy J. Laurent
,
Alexander G. Williams
,
Jonathan A. Eisen
,
Katherine S. Pollard
,
Thomas J. Sharpton
Automated and Accurate Estimation of Gene Family Abundance from Shotgun Metagenomes.
PLoS Comput. Biol.
11 (11) (2015)
Stephen Nayfach
,
Michael A. Fischbach
,
Katherine S. Pollard
MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome.
Bioinform.
31 (20) (2015)