Stefan J. Zasada

Publication Activity (10 Years)

Years Active: 2006-2018
Publications (10 Years): 7

Top Venues

CoRR

J. Comput. Sci.

AMIA

CBMS

University College London, UK (PHD)

Education History

University College London, UK

PHD

Publications

Jumana Dakka, Kristof Farkas-Pall, Vivek Balasubramanian, Matteo Turilli, Shunzhou Wan, David W. Wright, Stefan J. Zasada, Peter V. Coveney, Shantenu Jha
Enabling Trade-offs Between Accuracy and Computational Cost: Adaptive Algorithms to Reduce Time to Clinical Insight. CCGrid (2018)
Jumana Dakka, Matteo Turilli, David W. Wright, Stefan J. Zasada, Vivek Balasubramanian, Shunzhou Wan, Peter V. Coveney, Shantenu Jha
High-throughput binding affinity calculations at extreme scales. BMC Bioinform. (18) (2018)
Jumana Dakka, Kristof Farkas-Pall, Vivek Balasubramanian, Matteo Turilli, David W. Wright, Shunzhou Wan, Stefan J. Zasada, Peter V. Coveney, Shantenu Jha
Rapid, concurrent and adaptive extreme scale binding free energy calculation. CoRR (2018)
Jumana Dakka, Matteo Turilli, David W. Wright, Stefan J. Zasada, Vivek Balasubramanian, Shunzhou Wan, Peter V. Coveney, Shantenu Jha
High-throughput Binding Affinity Calculations at Extreme Scales. CoRR (2017)
Derek Groen, Agastya Bhati, James J. Suter, James Hetherington, Stefan J. Zasada, Peter V. Coveney
FabSim: Facilitating computational research through automation on large-scale and distributed e-infrastructures. Comput. Phys. Commun. 207 (2016)
Derek Groen, Agastya Bhati, James J. Suter, James Hetherington, Stefan J. Zasada, Peter V. Coveney
FabSim: facilitating computational research through automation on large-scale and distributed e-infrastructures. CoRR (2015)
Stefan J. Zasada, Peter V. Coveney
A Distributed Multi-agent Market Place for HPC Compute Cycle Resource Trading. CoRR (2015)
J. Marés, Lev Shamardin, Gabriele Weiler, Alberto Anguita, Stelios Sfakianakis, Elias Neri, Stefan J. Zasada, Norbert M. Graf, Peter V. Coveney
p-medicine: A Medical Informatics Platform for Integrated Large Scale Heterogeneous Patient Data. AMIA (2014)
Stefan J. Zasada, David Chan-Wei Chang, Ali Nasrat Haidar, Peter V. Coveney
Flexible composition and execution of large scale applications on distributed e-infrastructures. J. Comput. Sci. 5 (1) (2014)
Derek Groen, Stefan J. Zasada, Peter V. Coveney
Survey of Multiscale and Multiphysics Applications and Communities. Comput. Sci. Eng. 16 (2) (2014)
Chris Johnson, Anastasia V. Bochenkova, Alexander A. Granovsky, Peter J. Bond, Teresa Paramo, Tristan Glatard, William A. Romero R., Denis Friboulet, Stefan J. Zasada, Peter V. Coveney
PRACE DECI (Distributed European Computing Initiative) Minisymposium. PARCO (2013)
Katarzyna Rycerz, Eryk Ciepiela, Grzegorz Dyk, Derek Groen, Tomasz Gubala, Daniel Harezlak, Maciej Pawlik, James J. Suter, Stefan J. Zasada, Peter V. Coveney, Marian Bubak
Support for Multiscale Simulations with Molecular Dynamics. ICCS (2013)
Morris Riedel, Peter Wittenburg, Johannes Reetz, Mark van de Sanden, Jedrzej Rybicki, Benedikt von St. Vieth, Giuseppe Fiameni, Giacomo Mariani, Alberto Michelini, Claudio Cacciari, Willem Elbers, Daan Broeder, Robert Verkerk, Elena Erastova, Michael Lautenschlaeger, Reinhard Budig, Hannes Thiemann, Peter V. Coveney, Stefan J. Zasada, Ali Nasrat Haidar, Otto Buechner, Cristina Manzano, A. Shiraz Memon, Ahmed Shiraz Memon, Heikki Helin, Jari Suhonen, Damien Lecarpentier, Kimmo Koski, Thomas Lippert
A data infrastructure reference model with applications: towards realization of a ScienceTube vision with a data replication service. J. Internet Serv. Appl. 4 (1) (2013)
David Chan-Wei Chang, Stefan J. Zasada, Peter V. Coveney
The Application Hosting Environment 3.0: Simplifying biomedical simulations using RESTful web services. CBMS (2012)
Stefan J. Zasada, Mariusz Mamonski, Derek Groen, Joris Borgdorff, Ilya Saverchenko, Tomasz Piontek, Krzysztof Kurowski, Peter V. Coveney
Distributed Infrastructure for Multiscale Computing. DS-RT (2012)
Stefan J. Zasada, Ali Nasrat Haidar, Peter V. Coveney
A Comparative Analysis of the Usability and Legal Implications of Different Patient Data Sharing Architectures. AMIA (2012)
Derek Groen, Joris Borgdorff, Carles Bona-Casas, James Hetherington, Rupert W. Nash, Stefan J. Zasada, Ilya Saverchenko, Mariusz Mamonski, Krzysztof Kurowski, Miguel O. Bernabeu, Alfons G. Hoekstra, Peter V. Coveney
Flexible composition and execution of high performance, high fidelity multiscale biomedical simulations CoRR (2012)
Derek Groen, Stefan J. Zasada, Peter V. Coveney
Survey of Multiscale and Multiphysics Applications and Communities CoRR (2012)
Stefan J. Zasada, Tao Wang, Ali Nasrat Haidar, Enjie Liu, Norbert M. Graf, Gordon Clapworthy, Steven Manos, Peter V. Coveney
IMENSE: An e-infrastructure environment for patient specific multiscale data integration, modelling and clinical treatment. J. Comput. Sci. 3 (5) (2012)
Nour Shublaq, Stefan J. Zasada, Peter V. Coveney
Exciting Times in Computational Science. J. Comput. Sci. 2 (4) (2011)
Stefan J. Zasada, Ali Nasrat Haidar, Peter V. Coveney
Audited credential delegation: a usable identity management solution for grid environments. TG (2011)
Stefan J. Zasada, Derek Groen, Peter V. Coveney
Developing an infrastructure to support multiscale modelling and simulation. TG (2011)
Derek Groen, Stefan J. Zasada, Peter V. Coveney
Taxonomy of Multiscale Computing Communities. e-Science Workshops (2011)
Morris Riedel, Bernd Schuller, Michael Rambadt, M. Shahbaz Memon, A. Shiraz Memon, Achim Streit, Thomas Lippert, Stefan J. Zasada, Steven Manos, Peter V. Coveney, Felix Wolf, Dieter Kranzlmüller
Exploring the Potential of Using Multiple E-science Infrastructures with Emerging Open Standards-Based E-health Research Tools. CCGRID (2010)
Peter V. Coveney, G. Giupponi, Shantenu Jha, Steven Manos, Jon MacLaren, Stephen Pickles, R. S. Saksena, Thomas Soddemann, James L. Suter, Mary-Ann Thyveetil, Stefan J. Zasada
Large scale computational science on federated international grids: The role of switched optical networks. Future Gener. Comput. Syst. 26 (1) (2010)
Ali Nasrat Haidar, Stefan J. Zasada, Peter V. Coveney, Ali E. Abdallah, Bruce Beckles
Audited credential delegation - a user-centric identity management solution for computational grid environments. IAS (2010)
Stefan J. Zasada, Peter V. Coveney
Computational biomedicine: The role of workflow tools. ICCS (1) (2010)
Stefan J. Zasada, Peter V. Coveney
From campus resources to federated international grids: bridging the gap with the application hosting environment. SC-GCE (2009)
Stefan J. Zasada, Peter V. Coveney
Virtualizing access to scientific applications with the Application Hosting Environment. Comput. Phys. Commun. 180 (12) (2009)
Stefan J. Zasada, C. V. Gale, Steven Manos, Peter V. Coveney
Supercomputing in Clinical Practice. ERCIM News 2008 (74) (2008)
S. Kashif Sadiq, David W. Wright, Simon J. Watson, Stefan J. Zasada, Ileana Stoica, Peter V. Coveney
Automated Molecular Simulation Based Binding Affinity Calculator for Ligand-Bound HIV-1 Proteases. J. Chem. Inf. Model. 48 (9) (2008)
Peter V. Coveney, R. S. Saksena, Stefan J. Zasada, Mark McKeown, Stephen Pickles
The application hosting environment: Lightweight middleware for grid-based computational science. Comput. Phys. Commun. 176 (6) (2007)
S. Kashif Sadiq, Stefan J. Zasada, Peter V. Coveney
Grid Assisted Ensemble Molecular Dynamics Simulations of HIV-1 Proteases Reveal Novel Conformations of the Inhibitor Saquinavir. CompLife (2006)
Stefan J. Zasada, R. S. Saksena, Peter V. Coveney, Mark McKeown, Stephen Pickles
Facilitating User Access to the Grid: A Lightweight Application Hosting Environment for Grid Enabled Computational Science. e-Science (2006)

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Publication Activity (10 Years)

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Stefan J. Zasada