Ruchi Chaudhary

Publication Activity (10 Years)

Years Active: 2010-2015
Publications (10 Years): 0

Top Topics

Constraint Graph

Phylogenetic Analysis

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Ruchi Chaudhary, David Fernández-Baca, J. Gordon Burleigh
Constructing and Employing Tree Alignment Graphs for Phylogenetic Synthesis. CoRR (2015)
Ruchi Chaudhary, David Fernández-Baca, J. Gordon Burleigh
Constructing and Employing Tree Alignment Graphs for Phylogenetic Synthesis. AlCoB (2015)
Ruchi Chaudhary, David Fernández-Baca, John Gordon Burleigh
MulRF: a software package for phylogenetic analysis using multi-copy gene trees. Bioinform. 31 (3) (2015)
Ruchi Chaudhary, John Gordon Burleigh, David Fernández-Baca
Inferring species trees from incongruent multi-copy gene trees using the Robinson-Foulds distance. Algorithms Mol. Biol. 8 (2013)
Ruchi Chaudhary, J. Gordon Burleigh, Oliver Eulenstein
Efficient error correction algorithms for gene tree reconciliation based on duplication, duplication and loss, and deep coalescence. BMC Bioinform. 13 (S-10) (2012)
Ruchi Chaudhary, J. Gordon Burleigh, David Fernández-Baca
Inferring Species Trees from Incongruent Multi-Copy Gene Trees Using the Robinson-Foulds Distance CoRR (2012)
Ruchi Chaudhary, J. Gordon Burleigh, David Fernández-Baca
Fast Local Search for Unrooted Robinson-Foulds Supertrees. IEEE ACM Trans. Comput. Biol. Bioinform. 9 (4) (2012)
Ruchi Chaudhary, J. Gordon Burleigh, Oliver Eulenstein
Algorithms for Rapid Error Correction for the Gene Duplication Problem. ISBRA (2011)
Ruchi Chaudhary, J. Gordon Burleigh, David Fernández-Baca
Fast Local Search for Unrooted Robinson-Foulds Supertrees. ISBRA (2011)
Ruchi Chaudhary, Mukul S. Bansal, André Wehe, David Fernández-Baca, Oliver Eulenstein
iGTP: A software package for large-scale gene tree parsimony analysis. BMC Bioinform. 11 (2010)