Ronghui You

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 17

Top Topics

Distributed Learning

Text Representation

Protein Function Prediction

Top Venues

Publications

Yuhao Yi, Ronghui You, Hong Liu, Changxin Liu, Yuan Wang, Jiancheng Lv
Near-Optimal Resilient Aggregation Rules for Distributed Learning Using 1-Center and 1-Mean Clustering with Outliers. AAAI (2024)
Yuhao Yi, Ronghui You, Hong Liu, Changxin Liu, Yuan Wang, Jiancheng Lv
Near-Optimal Resilient Aggregation Rules for Distributed Learning Using 1-Center and 1-Mean Clustering with Outliers. CoRR (2023)
Wei Qu, Ronghui You, Hiroshi Mamitsuka, Shanfeng Zhu
DeepMHCI: an anchor position-aware deep interaction model for accurate MHC-I peptide binding affinity prediction. Bioinform. 39 (9) (2023)
Shaojun Wang, Ronghui You, Yunjia Liu, Yi Xiong, Shanfeng Zhu
NetGO 3.0: Protein Language Model Improves Large-scale Functional Annotations. Genom. Proteom. Bioinform. 21 (2) (2023)
Ronghui You, Shuwei Yao, Hiroshi Mamitsuka, Shanfeng Zhu
DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction. Bioinform. 37 (Supplement) (2021)
Shuwei Yao, Ronghui You, Shaojun Wang, Yi Xiong, Xiaodi Huang, Shanfeng Zhu
NetGO 2.0: improving large-scale protein function prediction with massive sequence, text, domain, family and network information. Nucleic Acids Res. 49 (Webserver-Issue) (2021)
Ronghui You, Yuxuan Liu, Hiroshi Mamitsuka, Shanfeng Zhu
BERTMeSH: deep contextual representation learning for large-scale high-performance MeSH indexing with full text. Bioinform. 37 (5) (2021)
Suyang Dai, Ronghui You, Zhiyong Lu, Xiaodi Huang, Hiroshi Mamitsuka, Shanfeng Zhu
FullMeSH: improving large-scale MeSH indexing with full text. Bioinform. 36 (5) (2020)
Ronghui You, Shuwei Yao, Yi Xiong, Xiaodi Huang, Fengzhu Sun, Hiroshi Mamitsuka, Shanfeng Zhu
NetGO: improving large-scale protein function prediction with massive network information. Nucleic Acids Res. 47 (Webserver-Issue) (2019)
Ronghui You, Zihan Zhang, Ziye Wang, Suyang Dai, Hiroshi Mamitsuka, Shanfeng Zhu
AttentionXML: Label Tree-based Attention-Aware Deep Model for High-Performance Extreme Multi-Label Text Classification. NeurIPS (2019)
Ronghui You, Zihan Zhang, Suyang Dai, Shanfeng Zhu
HAXMLNet: Hierarchical Attention Network for Extreme Multi-Label Text Classification. CoRR (2019)
Zhirui Liao, Ronghui You, Xiaodi Huang, Xiaojun Yao, Tao Huang, Shanfeng Zhu
DeepDock: Enhancing Ligand-protein Interaction Prediction by a Combination of Ligand and Structure Information. BIBM (2019)
Ronghui You, Zihan Zhang, Yi Xiong, Fengzhu Sun, Hiroshi Mamitsuka, Shanfeng Zhu
GOLabeler: improving sequence-based large-scale protein function prediction by learning to rank. Bioinform. 34 (14) (2018)
Ronghui You, Suyang Dai, Zihan Zhang, Hiroshi Mamitsuka, Shanfeng Zhu
AttentionXML: Extreme Multi-Label Text Classification with Multi-Label Attention Based Recurrent Neural Networks. CoRR (2018)
Yuan Tang, Ronghui You
POSTER: STAR (Space-Time Adaptive and Reductive) Algorithms for Real-World Space-Time Optimality. PPOPP (2017)
Ronghui You, Shanfeng Zhu
DeepText2Go: Improving large-scale protein function prediction with deep semantic text representation. BIBM (2017)
Shengwen Peng, Ronghui You, Hongning Wang, Chengxiang Zhai, Hiroshi Mamitsuka, Shanfeng Zhu
DeepMeSH: deep semantic representation for improving large-scale MeSH indexing. Bioinform. 32 (12) (2016)
Shengwen Peng, Ronghui You, Zhikai Xie, Beichen Wang, Yanchun Zhang, Shanfeng Zhu
The Fudan Participation in the 2015 BioASQ Challenge: Large-scale Biomedical Semantic Indexing and Question Answering. CLEF (Working Notes) (2015)
Ronghui You, Shengwen Peng, Shanfeng Zhu, Yuanjie Zhou
FDUMedSearch at TREC 2015 Clinical Decision Support Track. TREC (2015)
Yuan Tang, Ronghui You, Haibin Kan, Jesmin Jahan Tithi, Pramod Ganapathi, Rezaul Alam Chowdhury
Cache-oblivious wavefront: improving parallelism of recursive dynamic programming algorithms without losing cache-efficiency. PPOPP (2015)