Rasmus Fonseca

Publication Activity (10 Years)

Years Active: 2009-2018
Publications (10 Years): 7

Top Topics

Sequence Similarity

Nearest Neighbor Searching

Amino Acid Sequences

Protein Structure Prediction

Top Venues

J. Comput. Biol.

J. Comput. Chem.

Publications

Rasmus Fonseca, Dominik Budday, Henry van den Bedem
Collision-free poisson motion planning in ultra high-dimensional molecular conformation spaces. J. Comput. Chem. 39 (12) (2018)
Amélie Héliou, Dominik Budday, Rasmus Fonseca, Henry van den Bedem
Fast, Clash-Free RNA Conformational Morphing using Molecular Junctions. BCB (2017)
Amélie Héliou, Dominik Budday, Rasmus Fonseca, Henry van den Bedem
Fast, clash-free RNA conformational morphing using molecular junctions. Bioinform. 33 (14) (2017)
Rasmus Fonseca, Henry van den Bedem, Julie Bernauer
Probing RNA Native Conformational Ensembles with Structural Constraints. J. Comput. Biol. 23 (5) (2016)
Rasmus Fonseca, Dominik Budday, Henry van den Bedem
Collision-Free Poisson Motion Planning in Ultra High-Dimensional Molecular Conformation Spaces. CoRR (2016)
Rasmus Fonseca, Henry van den Bedem, Julie Bernauer
KGSrna: Efficient 3D Kinematics-Based Sampling for Nucleic Acids. RECOMB (2015)
Pawel Winter, Rasmus Fonseca
Alpha Complexes in Protein Structure Prediction. BIOINFORMATICS (2015)
Rasmus Fonseca, Pawel Winter
Bounding Volumes for Proteins: A Comparative Study. J. Comput. Biol. 19 (10) (2012)
Pawel Winter, Rasmus Fonseca
Adjustable Chain Trees for Proteins. J. Comput. Biol. 19 (1) (2012)
Rasmus Fonseca, Pawel Winter, Kevin Karplus
Protein Packing Quality Using Delaunay Complexes. ISVD (2011)
Rasmus Fonseca, Glennie Helles, Pawel Winter
Ranking Beta Sheet Topologies with Applications to Protein Structure Prediction. J. Math. Model. Algorithms 10 (4) (2011)
Rasmus Fonseca, Martin Paluszewski, Pawel Winter
Protein Structure Prediction Using Bee Colony Optimization Metaheuristic. J. Math. Model. Algorithms 9 (2) (2010)
Glennie Helles, Rasmus Fonseca
Predicting dihedral angle probability distributions for protein coil residues from primary sequence using neural networks. BMC Bioinform. 10 (2009)