Raffaello Potestio

Publication Activity (10 Years)

Years Active: 2009-2024
Publications (10 Years): 5

Top Topics

Deterministic Annealing

Dense Correspondences

Computer Simulation

Variable Resolution

Top Venues

J. Chem. Inf. Model.

Publications

Marco Giulini, Raffaele Fiorentini, Luca Tubiana, Raffaello Potestio, Roberto Menichetti
EXCOGITO, an Extensible Coarse-Graining Toolbox for the Investigation of Biomolecules by Means of Low-Resolution Representations. J. Chem. Inf. Model. 64 (12) (2024)
Jules Morand, Shoichi Yip, Yannis Velegrakis, Gianluca Lattanzi, Raffaello Potestio, Luca Tubiana
Emergent circulation patterns from anonymized mobility data: Clustering Italy in the time of Covid. CoRR (2023)
Raffaele Fiorentini, Thomas Tarenzi, Raffaello Potestio
Fast, Accurate, and System-Specific Variable-Resolution Modeling of Proteins. J. Chem. Inf. Model. 63 (4) (2023)
Federico Errica, Marco Giulini, Davide Bacciu, Roberto Menichetti, Alessio Micheli, Raffaello Potestio
Accelerating the identification of informative reduced representations of proteins with deep learning for graphs. CoRR (2020)
Maziar Heidari, Kurt Kremer, Raffaello Potestio, Robinson Cortes-Huerto
Fluctuations, Finite-Size Effects and the Thermodynamic Limit in Computer Simulations: Revisiting the Spatial Block Analysis Method. Entropy 20 (4) (2018)
Raffaello Potestio, Christine Peter, Kurt Kremer
Computer Simulations of Soft Matter: Linking the Scales. Entropy 16 (8) (2014)
Guido Polles, Giuliana Indelicato, Raffaello Potestio, Paolo Cermelli, Reidun Twarock, Cristian Micheletti
Mechanical and Assembly Units of Viral Capsids Identified via Quasi-Rigid Domain Decomposition. PLoS Comput. Biol. 9 (11) (2013)
Giulia Morra, Raffaello Potestio, Cristian Micheletti, Giorgio Colombo
Corresponding Functional Dynamics across the Hsp90 Chaperone Family: Insights from a Multiscale Analysis of MD Simulations. PLoS Comput. Biol. 8 (3) (2012)
Raffaello Potestio, Tyanko Aleksiev, Francesco Pontiggia, Stefano Cozzini, Cristian Micheletti
ALADYN: a web server for aligning proteins by matching their large-scale motion. Nucleic Acids Res. 38 (Web-Server-Issue) (2010)
Raffaello Potestio, Cristian Micheletti, Henri Orland
Knotted vs. Unknotted Proteins: Evidence of Knot-Promoting Loops. PLoS Comput. Biol. 6 (7) (2010)
Tyanko Aleksiev, Raffaello Potestio, Francesco Pontiggia, Stefano Cozzini, Cristian Micheletti
PiSQRD: a web server for decomposing proteins into quasi-rigid dynamical domains. Bioinform. 25 (20) (2009)