R. Mark Henkelman

Publication Activity (10 Years)

Years Active: 1995-2022
Publications (10 Years): 4

Top Topics

Intensity Based Registration

Magnetic Resonance Imaging

Top Venues

Publications

A. Arbabi, Leigh Spencer Noakes, Dulcie A. Vousden, J. Dazai, Shoshana Spring, O. Botelho, T. Keshavarzian, M. Mattingly, Jacob Ellegood, L. M. J. Nutter, R. Wissmann, John G. Sled, Jason P. Lerch, R. Mark Henkelman, Brian J. Nieman
Multiple-mouse magnetic resonance imaging with cryogenic radiofrequency probes for evaluation of brain development. NeuroImage 252 (2022)
Darren J. Fernandes, Jacob Ellegood, Rand Askalan, Randy D. Blakely, Emanuel Dicicco-Bloom, Sean E. Egan, Lucy R. Osborne, Craig M. Powell, Armin Raznahan, Diane M. Robins, Michael W. Salter, Ameet S. Sengar, Jeremy Veenstra-VanderWeele, R. Mark Henkelman, Jason P. Lerch
Spatial gene expression analysis of neuroanatomical differences in mouse models. NeuroImage 163 (2017)
Joanes Grandjean, Rebecca Derungs, Luka Kulic, Tobias Welt, R. Mark Henkelman, Roger M. Nitsch, Markus Rudin
Complex interplay between brain function and structure during cerebral amyloidosis in APP transgenic mouse strains revealed by multi-parametric MRI comparison. NeuroImage 134 (2016)
Jan Scholz, Christine L. Laliberté, Matthijs C. van Eede, Jason P. Lerch, R. Mark Henkelman
Variability of brain anatomy for three common mouse strains. NeuroImage 142 (2016)
Jacob Ellegood, Brooke A. Babineau, R. Mark Henkelman, Jason P. Lerch, Jacqueline N. Crawley
Neuroanatomical analysis of the BTBR mouse model of autism using magnetic resonance imaging and diffusion tensor imaging. NeuroImage 70 (2013)
Matthijs C. van Eede, Jan Scholz, M. Mallar Chakravarty, R. Mark Henkelman, Jason P. Lerch
Mapping registration sensitivity in MR mouse brain images. NeuroImage 82 (2013)
Jason P. Lerch, Lisa Gazdzinski, Jürgen Germann, John G. Sled, R. Mark Henkelman, Brian J. Nieman
Wanted dead or alive? The tradeoff between in-vivo versus ex-vivo MR brain imaging in the mouse. Frontiers Neuroinformatics 6 (2012)
Lindsay S. Cahill, Christine L. Laliberté, Jacob Ellegood, Shoshana Spring, Jacqueline A. Gleave, Matthijs C. van Eede, Jason P. Lerch, R. Mark Henkelman
Preparation of fixed mouse brains for MRI. NeuroImage 60 (2) (2012)
Leila Baghdadi, Mojdeh Zamyadi, John G. Sled, Jürgen E. Schneider, Shuomo Bhattacharya, R. Mark Henkelman, Jason P. Lerch
Semi-Automatic Segmentation of Multiple Mouse Embryos in MR Images. BMC Bioinform. 12 (2011)
Jason P. Lerch, Adelaide P. Yiu, Alonso Martinez-Canabal, Tetyana Pekar, Veronique D. Bohbot, Paul W. Frankland, R. Mark Henkelman, Sheena A. Josselyn, John G. Sled
Maze training in mice induces MRI-detectable brain shape changes specific to the type of learning. NeuroImage 54 (3) (2011)
Artem Khmelinskii, Martin Baiker, X. Josette Chen, Johan H. C. Reiber, R. Mark Henkelman, Boudewijn P. F. Lelieveldt
Atlas-based organ & bone approximation for ex-vivo µMRI mouse data: a pilot study. ISBI (2010)
Shoshana Spring, Jason P. Lerch, Monica K. Wetzel, Alan C. Evans, R. Mark Henkelman
Cerebral asymmetries in 12-week-old C57Bl/6J mice measured by magnetic resonance imaging. NeuroImage 50 (2) (2010)
X. Josette Chen, Satheesh Maheswaran, Daniel Rueckert, R. Mark Henkelman
Image registration of whole-body mouse MRI. ISBI (2010)
Jacob Ellegood, Laura K. Pacey, David R. Hampson, Jason P. Lerch, R. Mark Henkelman
Anatomical phenotyping in a mouse model of fragile X syndrome with magnetic resonance imaging. NeuroImage 53 (3) (2010)
Brige P. Chugh, Jason P. Lerch, Lisa X. Yu, Martin Pienkowski, Robert V. Harrison, R. Mark Henkelman, John G. Sled
Measurement of cerebral blood volume in mouse brain regions using micro-computed tomography. NeuroImage 47 (4) (2009)
Jonathan C. Lau, Jason P. Lerch, John G. Sled, R. Mark Henkelman, Alan C. Evans, Barry J. Bedell
Longitudinal neuroanatomical changes determined by deformation-based morphometry in a mouse model of Alzheimer's disease. NeuroImage 42 (1) (2008)
Jason P. Lerch, Jeffrey B. Carroll, Adrienne Dorr, Shoshana Spring, Alan C. Evans, Michael R. Hayden, John G. Sled, R. Mark Henkelman
Cortical thickness measured from MRI in the YAC128 mouse model of Huntington's disease. NeuroImage 41 (2) (2008)
Jason P. Lerch, Jeffrey B. Carroll, Shoshana Spring, Lisa N. Bertram, Claudia Schwab, Michael R. Hayden, R. Mark Henkelman
Automated deformation analysis in the YAC128 Huntington disease mouse model. NeuroImage 39 (1) (2008)
A. E. Dorr, Jason P. Lerch, Shoshana Spring, Noor Jehan Kabani, R. Mark Henkelman
High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice. NeuroImage 42 (1) (2008)
Shoshana Spring, Jason P. Lerch, R. Mark Henkelman
Sexual dimorphism revealed in the structure of the mouse brain using three-dimensional magnetic resonance imaging. NeuroImage 35 (4) (2007)
X. Josette Chen, Natasa Kovacevic, Nancy J. Lobaugh, John G. Sled, R. Mark Henkelman, Jeff Henderson
Neuroanatomical differences between mouse strains as shown by high-resolution 3D MRI. NeuroImage 29 (1) (2006)
Natasa Kovacevic, X. Josette Chen, John G. Sled, Jeff Henderson, R. Mark Henkelman
Deformation Based Representation of Groupwise Average and Variability. MICCAI (1) (2004)
Natasa Kovacevic, Ghassan Hamarneh, R. Mark Henkelman
Anatomically Guided Registration of Whole Body Mouse MR Images. MICCAI (2) (2003)
Ghassan Hamarneh, X. Josette Chen, Brian Neiman, Jeff Henderson, R. Mark Henkelman
Segmentation, Registration, and Deformation Analysis of 3D MR Images of Mice. MICCAI (2) (2003)
Greig C. Scott, Michael L. G. Joy, Robin L. Armstrong, R. Mark Henkelman
Electromagnetic considerations for RF current density imaging [MRI technique]. IEEE Trans. Medical Imaging 14 (3) (1995)