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Pilar Cossio
ORCID
Publication Activity (10 Years)
Years Active: 2010-2023
Publications (10 Years): 9
Top Topics
Protein Structure
Top Venues
Comput. Phys. Commun.
J. Chem. Inf. Model.
J. Comput. Aided Mol. Des.
Mach. Learn. Sci. Technol.
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Publications
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Lars Dingeldein
,
Pilar Cossio
,
Roberto Covino
Simulation-based inference of single-molecule force spectroscopy.
Mach. Learn. Sci. Technol.
4 (2) (2023)
Rodrigo Ochoa
,
Pilar Cossio
,
Thomas Fox
Protocol for iterative optimization of modified peptides bound to protein targets.
J. Comput. Aided Mol. Des.
36 (11) (2022)
Rodrigo Ochoa
,
Miguel A. Soler
,
Alessandro Laio
,
Pilar Cossio
PARCE: Protocol for Amino acid Refinement through Computational Evolution.
Comput. Phys. Commun.
260 (2021)
Rodrigo Ochoa
,
Mikhail D. Magnitov
,
Roman A. Laskowski
,
Pilar Cossio
,
Janet M. Thornton
An automated protocol for modelling peptide substrates to proteases.
BMC Bioinform.
21 (1) (2020)
Isaias Lans
,
Ernesto Anoz-Carbonell
,
Karen Palacio-Rodríguez
,
José Antonio Aínsa
,
Milagros Medina
,
Pilar Cossio
In silico discovery and biological validation of ligands of FAD synthase, a promising new antimicrobial target.
PLoS Comput. Biol.
16 (8) (2020)
Pilar Cossio
Need for Cross-Validation of Single Particle Cryo-EM.
J. Chem. Inf. Model.
60 (5) (2020)
Isaias Lans
,
Karen Palacio-Rodríguez
,
Claudio N. Cavasotto
,
Pilar Cossio
Flexi-pharma: a molecule-ranking strategy for virtual screening using pharmacophores from ligand-free conformational ensembles.
J. Comput. Aided Mol. Des.
34 (10) (2020)
Rodrigo Ochoa
,
Alessandro Laio
,
Pilar Cossio
Predicting the Affinity of Peptides to Major Histocompatibility Complex Class II by Scoring Molecular Dynamics Simulations.
J. Chem. Inf. Model.
59 (8) (2019)
Pilar Cossio
,
David Rohr
,
Fabio Baruffa
,
Markus Rampp
,
Volker Lindenstruth
,
Gerhard Hummer
BioEM: GPU-accelerated computing of Bayesian inference of electron microscopy images.
Comput. Phys. Commun.
210 (2017)
Edoardo Sarti
,
Stefano Zamuner
,
Pilar Cossio
,
Alessandro Laio
,
Flavio Seno
,
Antonio Trovato
BACHSCORE. A tool for evaluating efficiently and reliably the quality of large sets of protein structures.
Comput. Phys. Commun.
184 (12) (2013)
Pilar Cossio
,
Antonio Trovato
,
Fabio Pietrucci
,
Flavio Seno
,
Amos Maritan
,
Alessandro Laio
Exploring the Universe of Protein Structures beyond the Protein Data Bank.
PLoS Comput. Biol.
6 (11) (2010)