Pavel Tomancak

Publication Activity (10 Years)

Years Active: 2008-2022
Publications (10 Years): 14

Top Topics

Interactive Visual

Image Processing

Fully Unsupervised

Top Venues

ECCV Workshops (1)

Publications

Matthias Arzt, Joran Deschamps, Christopher Schmied, Tobias Pietzsch, Deborah Schmidt, Pavel Tomancak, Robert Haase, Florian Jug
LABKIT: Labeling and Segmentation Toolkit for Big Image Data. Frontiers Comput. Sci. 4 (2022)
Manan Lalit, Pavel Tomancak, Florian Jug
EmbedSeg: Embedding-based Instance Segmentation for Biomedical Microscopy Data. Medical Image Anal. 81 (2022)
Manan Lalit, Pavel Tomancak, Florian Jug
Embedding-based Instance Segmentation in Microscopy. MIDL (2021)
Manan Lalit, Pavel Tomancak, Florian Jug
Embedding-based Instance Segmentation of Microscopy Images. CoRR (2021)
Mangal Prakash, Manan Lalit, Pavel Tomancak, Alexander Krull, Florian Jug
Fully Unsupervised Probabilistic Noise2Void. ISBI (2020)
Mangal Prakash, Tim-Oliver Buchholz, Manan Lalit, Pavel Tomancak, Florian Jug, Alexander Krull
Leveraging Self-supervised Denoising for Image Segmentation. ISBI (2020)
Manan Lalit, Mette Handberg-Thorsager, Yu-Wen Hsieh, Florian Jug, Pavel Tomancak
Registration of Multi-modal Volumetric Images by Establishing Cell Correspondence. ECCV Workshops (1) (2020)
Ulrik Günther, Tobias Pietzsch, Aryaman Gupta, Kyle I. S. Harrington, Pavel Tomancak, Stefan Gumhold, Ivo F. Sbalzarini
scenery - Flexible Virtual Reality Visualisation on the Java VM. CoRR (2019)
Ulrik Günther, Tobias Pietzsch, Aryaman Gupta, Kyle I. S. Harrington, Pavel Tomancak, Stefan Gumhold, Ivo F. Sbalzarini
scenery: Flexible Virtual Reality Visualization on the Java VM. IEEE VIS (Short Papers) (2019)
Mangal Prakash, Tim-Oliver Buchholz, Manan Lalit, Pavel Tomancak, Florian Jug, Alexander Krull
Leveraging Self-supervised Denoising for Image Segmentation. CoRR (2019)
Vaclav Svaton, Jan Martinovic, Jan Krenek, Thomas Esch, Pavel Tomancak
HPC-as-a-Service via HEAppE Platform. CISIS (2019)
Mangal Prakash, Manan Lalit, Pavel Tomancak, Alexander Krull, Florian Jug
Fully Unsupervised Probabilistic Noise2Void. CoRR (2019)
Hendrik Sollich, Ulrich von Zadow, Tobias Pietzsch, Pavel Tomancak, Raimund Dachselt
Exploring Time-dependent Scientific Data Using Spatially Aware Mobiles and Large Displays. ISS (2016)
Christopher Schmied, Peter Steinbach, Tobias Pietzsch, Stephan Preibisch, Pavel Tomancak
An automated workflow for parallel processing of large multiview SPIM recordings. Bioinform. 32 (7) (2016)
Tobias Pietzsch, Stephan Saalfeld, Stephan Preibisch, Pavel Tomancak
BigDataViewer: Interactive Visualization and Image Processing for Terabyte Data Sets. CoRR (2014)
Tobias Pietzsch, Stephan Preibisch, Pavel Tomancak, Stephan Saalfeld
ImgLib2 - generic image processing in Java. Bioinform. 29 (2) (2013)
Tobias Pietzsch, Stephan Preibisch, Pavel Tomancak, Stephan Saalfeld
ImgLib2 - generic image processing in Java. Bioinform. 28 (22) (2012)
Alex T. Kalinka, Pavel Tomancak
linkcomm: an R package for the generation, visualization, and analysis of link communities in networks of arbitrary size and type. Bioinform. 27 (14) (2011)
Stephan Saalfeld, Albert Cardona, Volker Hartenstein, Pavel Tomancak
As-rigid-as-possible mosaicking and serial section registration of large ssTEM datasets. Bioinform. 26 (12) (2010)
Arunachalam Manonmani, Karthik Jayasurya, Pavel Tomancak, Uwe Ohler
genomes. Bioinform. 26 (17) (2010)
Stephan Saalfeld, Albert Cardona, Volker Hartenstein, Pavel Tomancak
CATMAID: collaborative annotation toolkit for massive amounts of image data. Bioinform. 25 (15) (2009)
Stephan Preibisch, Stephan Saalfeld, Torsten Rohlfing, Pavel Tomancak
Bead-based mosaicing of single plane illumination microscopy images using geometric local descriptor matching. Medical Imaging: Image Processing (2009)
Stephan Preibisch, Stephan Saalfeld, Pavel Tomancak
Globally optimal stitching of tiled 3D microscopic image acquisitions. Bioinform. 25 (11) (2009)
Stephan Preibisch, Torsten Rohlfing, Michael P. Hasak, Pavel Tomancak
Mosaicing of single plane illumination microscopy images using groupwise registration and fast content-based image fusion. Medical Imaging: Image Processing (2008)
Stephan Preibisch, Radoslaw Ejsmont, Torsten Rohlfing, Pavel Tomancak
Towards digital representation of Drosophila embryogenesis. ISBI (2008)