Patric Hagmann

Publication Activity (10 Years)

Years Active: 2002-2023
Publications (10 Years): 24

Top Topics

Change Detection

Top Venues

PLoS Comput. Biol.

Publications

Joan Rué Queralt, Valentina Mancini, Vincent Rochas, Caren Latrèche, Peter J. Uhlhaas, Christoph M. Michel, Gijs Plomp, Stephan Eliez, Patric Hagmann
The coupling between the spatial and temporal scales of neural processes revealed by a joint time-vertex connectome spectral analysis. NeuroImage 280 (2023)
Tommaso Di Noto, Guillaume Marie, Sébastien Tourbier, Yasser Alemán-Gómez, Oscar Esteban, Guillaume Saliou, Meritxell Bach Cuadra, Patric Hagmann, Jonas Richiardi
Towards Automated Brain Aneurysm Detection in TOF-MRA: Open Data, Weak Labels, and Anatomical Knowledge. Neuroinformatics 21 (1) (2023)
Tommaso Di Noto, Meritxell Bach Cuadra, Chirine Atat, Eduardo Gamito Teiga, Monika Hegi, Andreas Hottinger, Patric Hagmann, Jonas Richiardi
Transfer learning with weak labels from radiology reports: application to glioma change detection. CoRR (2022)
Sébastien Tourbier, Joan Rué Queralt, Katharina Glomb, Yasser Alemán-Gómez, Emeline Mullier, Alessandra Griffa, Mikkel Schöttner, Jonathan Wirsich, Mustafa Anil Tuncel, Jakub Jancovic, Meritxell Bach Cuadra, Patric Hagmann
Connectome Mapper 3: A Flexible and Open-Source Pipeline Software for Multiscale Multimodal Human Connectome Mapping. J. Open Source Softw. 7 (74) (2022)
Tommaso Di Noto, Guillaume Marie, Sébastien Tourbier, Yasser Alemán-Gómez, Oscar Esteban, Guillaume Saliou, Meritxell Bach Cuadra, Patric Hagmann, Jonas Richiardi
Weak labels and anatomical knowledge: making deep learning practical for intracranial aneurysm detection in TOF-MRA. CoRR (2021)
Vincent Bazinet, Reinder Vos de Wael, Patric Hagmann, Boris C. Bernhardt, Bratislav Misic
Multiscale communication in cortico-cortical networks. NeuroImage 243 (2021)
Hélène Lajous, Christopher W. Roy, Tom Hilbert, Priscille de Dumast, Sébastien Tourbier, Yasser Alemán-Gómez, Jérôme Yerly, Thomas Yu, Hamza Kebiri, Kelly Payette, Jean-Baptiste Ledoux, Reto Meuli, Patric Hagmann, András Jakab, Vincent Dunet, Mériam Koob, Tobias Kober, Matthias Stuber, Meritxell Bach Cuadra
FaBiAN: A Fetal Brain magnetic resonance Acquisition Numerical phantom. CoRR (2021)
Tommaso Di Noto, Chirine Atat, Eduardo Gamito Teiga, Monika Hegi, Andreas Hottinger, Meritxell Bach Cuadra, Patric Hagmann, Jonas Richiardi
Diagnostic Surveillance of High-Grade Gliomas: Towards Automated Change Detection Using Radiology Report Classification. PKDD/ECML Workshops (2) (2021)
Joan Rué Queralt, Katharina Glomb, David Pascucci, Sébastien Tourbier, Margherita Carboni, Serge Vulliémoz, Gijs Plomp, Patric Hagmann
The connectome spectrum as a canonical basis for a sparse representation of fast brain activity. NeuroImage 244 (2021)
Hélène Lajous, Tom Hilbert, Christopher W. Roy, Sébastien Tourbier, Priscille de Dumast, Yasser Alemán-Gómez, Thomas Yu, Hamza Kebiri, Jean-Baptiste Ledoux, Patric Hagmann, Reto Meuli, Vincent Dunet, Mériam Koob, Matthias Stuber, Tobias Kober, Meritxell Bach Cuadra
Simulated Half-Fourier Acquisitions Single-shot Turbo Spin Echo (HASTE) of the Fetal Brain: Application to Super-Resolution Reconstruction. UNSURE/PIPPI@MICCAI (2021)
Tommaso Di Noto, Guillaume Marie, Sébastien Tourbier, Yasser Alemán-Gómez, Guillaume Saliou, Meritxell Bach Cuadra, Patric Hagmann, Jonas Richiardi
An Anatomically-Informed 3D CNN for Brain Aneurysm Classification with Weak Labels. MLCN/RNO-AI@MICCAI (2020)
Tommaso Di Noto, Guillaume Marie, Sébastien Tourbier, Yasser Alemán-Gómez, Guillaume Saliou, Meritxell Bach Cuadra, Patric Hagmann, Jonas Richiardi
An anatomically-informed 3D CNN for brain aneurysm classification with weak labels. CoRR (2020)
Katharina Glomb, Joan Rué Queralt, David Pascucci, Michaël Defferrard, Sébastien Tourbier, Margherita Carboni, Maria Rubega, Serge Vulliémoz, Gijs Plomp, Patric Hagmann
Connectome spectral analysis to track EEG task dynamics on a subsecond scale. NeuroImage 221 (2020)
Hélène Lajous, Tom Hilbert, Christopher W. Roy, Sébastien Tourbier, Priscille de Dumast, Thomas Yu, Jean-Philippe Thiran, Jean-Baptiste Ledoux, Davide Piccini, Patric Hagmann, Reto Meuli, Tobias Kober, Matthias Stuber, Ruud B. van Heeswijk, Meritxell Bach Cuadra
T2 Mapping from Super-Resolution-Reconstructed Clinical Fast Spin Echo Magnetic Resonance Acquisitions. MICCAI (2) (2020)
Andrea Avena-Koenigsberger, Xiaoran Yan, Artemy Kolchinsky, Martijn P. van den Heuvel, Patric Hagmann, Olaf Sporns
A spectrum of routing strategies for brain networks. PLoS Comput. Biol. 15 (3) (2019)
Murat Demirtas, Adrián Ponce-Alvarez, Matthieu Gilson, Patric Hagmann, Dante Mantini, Viviana Betti, Gian Luca Romani, Karl J. Friston, Maurizio Corbetta, Gustavo Deco
Distinct modes of functional connectivity induced by movie-watching. NeuroImage 184 (2019)
Maria Rubega, David Pascucci, Joan Rué Queralt, Pieter van Mierlo, Patric Hagmann, Gijs Plomp, Christoph M. Michel
Time-varying effective EEG source connectivity: the optimization of model parameters. EMBC (2019)
Matthieu Gilson, Gustavo Deco, Karl J. Friston, Patric Hagmann, Dante Mantini, Viviana Betti, Gian Luca Romani, Maurizio Corbetta
Effective connectivity inferred from fMRI transition dynamics during movie viewing points to a balanced reconfiguration of cortical interactions. NeuroImage 180 (Part) (2018)
Magali Fröhlich, Christophe Bolinhas, Adrien Depeursinge, Antoine Widmer, Nicolas Chevrey, Patric Hagmann, Christian Simon, Vivianne B. C. Kokje, Stéphane Gobron
Holographic Visualisation and Interaction of Fused CT, PET and MRI Volumetric Medical Imaging Data Using Dedicated Remote GPGPU Ray Casting. POCUS/BIVPCS/CuRIOUS/CPM@MICCAI (2018)
Alessandra Griffa, Benjamin Ricaud, Kirell Benzi, Xavier Bresson, Alessandro Daducci, Pierre Vandergheynst, Jean-Philippe Thiran, Patric Hagmann
Transient networks of spatio-temporal connectivity map communication pathways in brain functional systems. NeuroImage 155 (2017)
Attila Csoma, Attila Korösi, Gábor Rétvári, Zalán Heszberger, József Bíró, Mariann Slíz, Andrea Avena-Koenigsberger, Alessandra Griffa, Patric Hagmann, András Gulyás
Routes Obey Hierarchy in Complex Networks. CoRR (2017)
Silvana Silva Pereira, Rikkert Hindriks, Stefanie Mühlberg, Eric Maris, Freek van Ede, Alessandra Griffa, Patric Hagmann, Gustavo Deco
Effect of Field Spread on Resting-State Magneto Encephalography Functional Network Analysis: A Computational Modeling Study. Brain Connect. 7 (9) (2017)
Sébastien Tourbier, Clemente Velasco-Annis, Vahid Taimouri, Patric Hagmann, Reto Meuli, Simon K. Warfield, Meritxell Bach Cuadra, Ali Gholipour
Automated template-based brain localization and extraction for fetal brain MRI reconstruction. NeuroImage 155 (2017)
Richard F. Betzel, Andrea Avena-Koenigsberger, Joaquín Goñi, Ye He, Marcel A. de Reus, Alessandra Griffa, Petra E. Vértes, Bratislav Misic, Jean-Philippe Thiran, Patric Hagmann, Martijn P. van den Heuvel, Xi-Nian Zuo, Edward T. Bullmore, Olaf Sporns
Generative models of the human connectome. NeuroImage 124 (2016)
Djalel Eddine Meskaldji, Lana Vasung, David Romascano, Jean-Philippe Thiran, Patric Hagmann, Stephan Morgenthaler, Dimitri Van De Ville
Improved statistical evaluation of group differences in connectomes by screening-filtering strategy with application to study maturation of brain connections between childhood and adolescence. NeuroImage 108 (2015)
Adrián Ponce-Alvarez, Gustavo Deco, Patric Hagmann, Gian Luca Romani, Dante Mantini, Maurizio Corbetta
Resting-State Temporal Synchronization Networks Emerge from Connectivity Topology and Heterogeneity. PLoS Comput. Biol. 11 (2) (2015)
Sébastien Tourbier, Xavier Bresson, Patric Hagmann, Jean-Philippe Thiran, Reto Meuli, Meritxell Bach Cuadra
An efficient total variation algorithm for super-resolution in fetal brain MRI with adaptive regularization. NeuroImage 118 (2015)
Adrián Ponce-Alvarez, Biyu J. He, Patric Hagmann, Gustavo Deco
Task-Driven Activity Reduces the Cortical Activity Space of the Brain: Experiment and Whole-Brain Modeling. PLoS Comput. Biol. 11 (8) (2015)
Sébastien Tourbier, Patric Hagmann, Maud Cagneaux, Laurent Guibaud, Sai Subrahmanyam Gorthi, Marie Schaer, Jean-Philippe Thiran, Reto Meuli, Meritxell Bach Cuadra
Automatic brain extraction in fetal MRI using multi-atlas-based segmentation. Medical Imaging: Image Processing (2015)
Sébastien Tourbier, Xavier Bresson, Patric Hagmann, Jean-Philippe Thiran, Reto Meuli, Meritxell Bach Cuadra
Efficient Total Variation Algorithm for Fetal Brain MRI Reconstruction. MICCAI (2) (2014)
Artemy Kolchinsky, Martijn P. van den Heuvel, Alessandra Griffa, Patric Hagmann, Luis Mateus Rocha, Olaf Sporns, Joaquín Goñi
Multi-scale integration and predictability in resting state brain activity. Frontiers Neuroinformatics 8 (2014)
Djalel Eddine Meskaldji, Elda Fischi Gomez, Alessandra Griffa, Patric Hagmann, Stephan Morgenthaler, Jean-Philippe Thiran
Comparing connectomes across subjects and populations at different scales. NeuroImage 80 (2013)
Alessandra Griffa, Philipp S. Baumann, Jean-Philippe Thiran, Patric Hagmann
Structural connectomics in brain diseases. NeuroImage 80 (2013)
Jonas Richiardi, Markus Gschwind, Samanta Simioni, Jean-Marie Annoni, Beatrice Greco, Patric Hagmann, Myriam Schluep, Patrik Vuilleumier, Dimitri Van De Ville
Classifying minimally disabled multiple sclerosis patients from resting state functional connectivity. NeuroImage 62 (3) (2012)
Stephan Gerhard, Alessandro Daducci, Alia Lemkaddem, Reto Meuli, Jean-Philippe Thiran, Patric Hagmann
The Connectome Viewer Toolkit: An Open Source Framework to Manage, Analyze, and Visualize Connectomes. Frontiers Neuroinformatics 5 (2011)
Jeffrey Alstott, Michael Breakspear, Patric Hagmann, Leila Cammoun, Olaf Sporns
Modeling the Impact of Lesions in the Human Brain. PLoS Comput. Biol. 5 (6) (2009)
Van J. Wedeen, R. P. Wang, Jeremy D. Schmahmann, Thomas Benner, Wen-Yih Isaac Tseng, Guangping Dai, D. N. Pandya, Patric Hagmann, Helen D'Arceuil, Alex J. de Crespigny
Diffusion spectrum magnetic resonance imaging (DSI) tractography of crossing fibers. NeuroImage 41 (4) (2008)
Lisa Jonasson, Patric Hagmann, Claudio Pollo, Xavier Bresson, Cecilia Richero Wilson, Reto Meuli, Jean-Philippe Thiran
A level set method for segmentation of the thalamus and its nuclei in DT-MRI. Signal Process. 87 (2) (2007)
Lisa Jonasson, Xavier Bresson, Jean-Philippe Thiran, Van J. Wedeen, Patric Hagmann
Representing Diffusion MRI in 5-D Simplifies Regularization and Segmentation of White Matter Tracts. IEEE Trans. Medical Imaging 26 (11) (2007)
Patric Hagmann, Lisa Jonasson, Thomas Deffieux, Reto Meuli, Jean-Philippe Thiran, Van J. Wedeen
Fibertract segmentation in position orientation space from high angular resolution diffusion MRI. NeuroImage 32 (2) (2006)
Lisa Jonasson, Patric Hagmann, Xavier Bresson, Jean-Philippe Thiran, Van J. Wedeen
Representing Diffusion MRI in 5D for Segmentation of White Matter Tracts with a Level Set Method. IPMI (2005)
Lisa Jonasson, Xavier Bresson, Patric Hagmann, Olivier Cuisenaire, Reto Meuli, Jean-Philippe Thiran
White matter fiber tract segmentation in DT-MRI using geometric flows. Medical Image Anal. 9 (3) (2005)
Patric Hagmann, Jean-Philippe Thiran, Lisa Jonasson, Pierre Vandergheynst, Stephanie Clarke, Philippe Maeder, Reto Meuli
DTI mapping of human brain connectivity: statistical fibre tracking and virtual dissection. NeuroImage 19 (3) (2003)
Torsten Butz, Patric Hagmann, Eric Tardif, Reto Meuli, Jean-Philippe Thiran
A New Brain Segmentation Framework. MICCAI (2) (2003)
Lisa Jonasson, Patric Hagmann, Xavier Bresson, Reto Meuli, Olivier Cuisenaire, Jean-Philippe Thiran
White Matter Mapping in DT-MRI Using Geometric Flows. EUROCAST (2003)
Meritxell Bach Cuadra, J. Gomez, Patric Hagmann, Claudio Pollo, Jean-Guy Villemure, Benoit M. Dawant, Jean-Philippe Thiran
Atlas-Based Segmentation of Pathological Brains Using a Model of Tumor Growth. MICCAI (1) (2002)