Oommen K. Mathew

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 6

Top Topics

Physicochemical Properties

Multiple Sequence Alignments

Protein Structural

Top Venues

Database J. Biol. Databases Curation

Nucleic Acids Res.

Briefings Bioinform.

Publications

Chinju John, Jayakrushna Sahoo, Irish K. Sajan, Manu Madhavan, Oommen K. Mathew
CNN-BLSTM based deep learning framework for eukaryotic kinome classification: An explainability based approach. Comput. Biol. Chem. 112 (2024)
Teerna Bhattacharyya, Soumya Nayak, Smit Goswami, Vasundhara Gadiyaram, Oommen K. Mathew, Ramanathan Sowdhamini
PASS2.7: a database containing structure-based sequence alignments and associated features of protein domain superfamilies from SCOPe. Database J. Biol. Databases Curation 2022 (2022) (2022)
Andrew C. Liu, Krishna Patel, Ramya Dhatri Vunikili, Kipp W. Johnson, Fahad Abdu, Shivani Kamath Belman, Benjamin S. Glicksberg, Pratyush Tandale, Roberto Fontanez, Oommen K. Mathew, Andrew Kasarskis, Priyabrata Mukherjee, Lakshminarayanan Subramanian, Joel T. Dudley, Khader Shameer
Sepsis in the era of data-driven medicine: personalizing risks, diagnoses, treatments and prognoses. Briefings Bioinform. 21 (4) (2020)
Pritha Ghosh, Teerna Bhattacharyya, Oommen K. Mathew, Ramanathan Sowdhamini
PASS2 version 6: a database of structure-based sequence alignments of protein domain superfamilies in accordance with SCOPe. Database J. Biol. Databases Curation 2019 (2019)
Arumugam Gandhimathi, Pritha Ghosh, Sridhar Hariharaputran, Oommen K. Mathew, Ramanathan Sowdhamini
PASS2 database for the structure-based sequence alignment of distantly related SCOP domain superfamilies: update to version 5 and added features. Nucleic Acids Res. 44 (Database-Issue) (2016)
Pritha Ghosh, Oommen K. Mathew, Ramanathan Sowdhamini
RStrucFam: a web server to associate structure and cognate RNA for RNA-binding proteins from sequence information. BMC Bioinform. 17 (2016)
Sony Malhotra, Oommen K. Mathew, Ramanathan Sowdhamini
DOCKSCORE: a webserver for ranking protein-protein docked poses. BMC Bioinform. 16 (2015)
Eshita Mutt, Oommen K. Mathew, Ramanathan Sowdhamini
LenVarDB: database of length-variant protein domains. Nucleic Acids Res. 42 (Database-Issue) (2014)