PASS2.7: a database containing structure-based sequence alignments and associated features of protein domain superfamilies from SCOPe.
Teerna BhattacharyyaSoumya NayakSmit GoswamiVasundhara GadiyaramOommen K. MathewRamanathan SowdhaminiPublished in: Database J. Biol. Databases Curation (2022)
Keyphrases
- database
- sequence alignment
- protein sequences
- databases
- protein structural
- structural information
- domain specific
- physicochemical properties
- feature vectors
- protein structure
- structural features
- co occurrence
- multiple sequence alignments
- temporal structure
- structural motifs
- multiple alignment
- relational databases
- sequence similarity
- sequence databases
- database systems
- sequence analysis
- multiple sequence alignment
- amino acids
- database applications
- data model
- biological sequences
- feature extraction
- complex structures
- protein families
- object model
- network structure
- feature set
- molecular structures
- query language