Olivier C. Martin

Publication Activity (10 Years)

Years Active: 1991-2024
Publications (10 Years): 4

Top Topics

Boolean Networks

Top Venues

Briefings Bioinform.

BMC Syst. Biol.

PLoS Comput. Biol.

Publications

Priyotosh Sil, Ajay Subbaroyan, Saumitra Kulkarni, Olivier C. Martin, Areejit Samal
Biologically meaningful regulatory logic enhances the convergence rate in Boolean networks and bushiness of their state transition graph. Briefings Bioinform. 25 (3) (2024)
Ajay Subbaroyan, Priyotosh Sil, Olivier C. Martin, Areejit Samal
Leveraging developmental landscapes for model selection in Boolean gene regulatory networks. Briefings Bioinform. 24 (3) (2023)
Adrien Vidal, Franck Gauthier, Willy Rodrigez, Nadège Guiglielmoni, Damien Leroux, Nicolas Chevrolier, Sylvain Jasson, Elise Tourrette, Olivier C. Martin, Matthieu Falque
SeSAM: software for automatic construction of order-robust linkage maps. BMC Bioinform. 23 (1) (2022)
Matteo Mori, Terence Hwa, Olivier C. Martin, Andrea De Martino, Enzo Marinari
Constrained Allocation Flux Balance Analysis. PLoS Comput. Biol. 12 (6) (2016)
Aditya Barve, Sayed-Rzgar Hosseini, Olivier C. Martin, Andreas Wagner
Historical contingency and the gradual evolution of metabolic properties in central carbon and genome-scale metabolisms. BMC Syst. Biol. 8 (2014)
Franck Gauthier, Olivier C. Martin, Matthieu Falque
CODA (CrossOver Distribution Analyzer): quantitative characterization of crossover position patterns along chromosomes. BMC Bioinform. 12 (2011)
Areejit Samal, Andreas Wagner, Olivier C. Martin
Environmental versatility promotes modularity in genome-scale metabolic networks. BMC Syst. Biol. 5 (2011)
Pierre-Yves Bourguignon, Areejit Samal, François Képès, Jürgen Jost, Olivier C. Martin
Challenges in experimental data integration within genome-scale metabolic models. Algorithms Mol. Biol. 5 (2010)
Areejit Samal, João F. Matias Rodrigues, Jürgen Jost, Olivier C. Martin, Andreas Wagner
Genotype networks in metabolic reaction spaces. BMC Syst. Biol. 4 (2010)
Petr Sulc, Andreas Wagner, Olivier C. Martin
Quantifying Slow Evolutionary Dynamics in RNA Fitness Landscapes. J. Bioinform. Comput. Biol. 8 (6) (2010)
Ivan Junier, Olivier C. Martin, François Képès
Spatial and Topological Organization of DNA Chains Induced by Gene Co-localization. PLoS Comput. Biol. 6 (2) (2010)
Damien M. de Vienne, Tatiana Giraud, Olivier C. Martin
In response to comment on 'A congruence index for testing topological similarity between trees'. Bioinform. 25 (1) (2009)
Thomas Jörg, Olivier C. Martin, Andreas Wagner
Neutral network sizes of biological RNA molecules can be computed and are not atypically small. BMC Bioinform. 9 (2008)
Damien M. de Vienne, Tatiana Giraud, Olivier C. Martin
A congruence index for testing topological similarity between trees. Bioinform. 23 (23) (2007)
Stefano Ciliberti, Olivier C. Martin, Andreas Wagner
Robustness Can Evolve Gradually in Complex Regulatory Gene Networks with Varying Topology. PLoS Comput. Biol. 3 (2) (2007)
Sumedha, Olivier C. Martin, Andreas Wagner
New structural variation in evolutionary searches of RNA neutral networks. Biosyst. 90 (2) (2007)
Olivier C. Martin, Rémi Monasson, Riccardo Zecchina
Statistical mechanics methods and phase transitions in optimization problems. Theor. Comput. Sci. 265 (1-2) (2001)
Olivier C. Martin, Steve W. Otto
Combining simulated annealing with local search heuristics. Ann. Oper. Res. 63 (1) (1996)
Olivier C. Martin, Steve W. Otto
Partitioning of unstructured meshes for load balancing. Concurr. Pract. Exp. 7 (4) (1995)
Olivier C. Martin, Steve W. Otto, Edward W. Felten
Large-step markov chains for the TSP incorporating local search heuristics. Oper. Res. Lett. 11 (4) (1992)
Olivier C. Martin, Steve W. Otto, Edward W. Felten
Large-Step Markov Chains for the Traveling Salesman Problem. Complex Syst. 5 (3) (1991)