Nicholas J. Dobbins

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 16

Top Topics

Natural Language

Temporal Dependencies

Top Venues

J. Am. Medical Informatics Assoc.

ClinicalNLP@ACL

Publications

Yujuan Fu, Giridhar Kaushik Ramachandran, Nicholas J. Dobbins, Namu Park, Michael Leu, Abby R. Rosenberg, Kevin Lybarger, Fei Xia, Özlem Uzuner, Meliha Yetisgen
Extracting Social Determinants of Health from Pediatric Patient Notes Using Large Language Models: Novel Corpus and Methods. LREC/COLING (2024)
Nicholas J. Dobbins
Generalizable and Scalable Multistage Biomedical Concept Normalization Leveraging Large Language Models. CoRR (2024)
Yujuan Fu, Giridhar Kaushik Ramachandran, Nicholas J. Dobbins, Namu Park, Michael Leu, Abby R. Rosenberg, Kevin Lybarger, Fei Xia, Özlem Uzuner, Meliha Yetisgen
Extracting Social Determinants of Health from Pediatric Patient Notes Using Large Language Models: Novel Corpus and Methods. CoRR (2024)
Nicholas J. Dobbins, Bin Han, Weipeng Zhou, Kristine Lan, H. Nina Kim, Robert D. Harrington, Özlem Uzuner, Meliha Yetisgen
LeafAI: query generator for clinical cohort discovery rivaling a human programmer. CoRR (2023)
Nicholas J. Dobbins, Bin Han, Weipeng Zhou, Kristine Lan, H. Nina Kim, Robert D. Harrington, Özlem Uzuner, Meliha Yetisgen
LeafAI: query generator for clinical cohort discovery rivaling a human programmer. J. Am. Medical Informatics Assoc. 30 (12) (2023)
Kevin Lybarger, Nicholas J. Dobbins, Ritche Long, Angad Singh, Patrick Wedgeworth, Özlem Uzuner, Meliha Yetisgen
Leveraging natural language processing to augment structured social determinants of health data in the electronic health record. J. Am. Medical Informatics Assoc. 30 (8) (2023)
Giridhar Kaushik Ramachandran, Yujuan Fu, Bin Han, Kevin Lybarger, Nicholas J. Dobbins, Özlem Uzuner, Meliha Yetisgen
Prompt-based Extraction of Social Determinants of Health Using Few-shot Learning. ClinicalNLP@ACL (2023)
Giridhar Kaushik Ramachandran, Yujuan Fu, Bin Han, Kevin Lybarger, Nicholas J. Dobbins, Özlem Uzuner, Meliha Yetisgen
Prompt-based Extraction of Social Determinants of Health Using Few-shot Learning. CoRR (2023)
Nicholas J. Dobbins, Tony Mullen, Özlem Uzuner, Meliha Yetisgen
The Leaf Clinical Trials Corpus: a new resource for query generation from clinical trial eligibility criteria. CoRR (2022)
Kevin Lybarger, Nicholas J. Dobbins, Ritche Long, Angad Singh, Patrick Wedgeworth, Özlem Ozuner, Meliha Yetisgen
Leveraging Natural Language Processing to Augment Structured Social Determinants of Health Data in the Electronic Health Record. CoRR (2022)
Yao Yan, Thomas Yu, Kathleen Muenzen, Sijia Liu, Connor Boyle, George Koslowski, Jiaxin Zheng, Nicholas J. Dobbins, Clement Essien, Hongfang Liu, Larsson Omberg, Meliha Yestigen, Bradley Taylor, James A. Eddy, Justin Guinney, Sean D. Mooney, Thomas Schaffter
The NLP Sandbox: an efficient model-to-data system to enable federated and unbiased evaluation of clinical NLP models. CoRR (2022)
Kahyun Lee, Nicholas J. Dobbins, Bridget T. McInnes, Meliha Yetisgen, Özlem Uzuner
Transferability of neural network clinical deidentification systems. J. Am. Medical Informatics Assoc. 28 (12) (2021)
Nicholas J. Dobbins, David Wayne, Kahyun Lee, Özlem Uzuner, Meliha Yetisgen
Performance of Automatic De-identification Across Different Note Types. CoRR (2021)
Kahyun Lee, Nicholas J. Dobbins, Bridget T. McInnes, Meliha Yetisgen, Özlem Uzuner
Transferability of Neural Network-based De-identification Systems. CoRR (2021)
Jimmy Phuong, Elizabeth Zampino, Nicholas J. Dobbins, Juan Espinoza, Daniella Meeker, Heidi Spratt, Charisse R. Madlock-Brown, Nicole Gray Weiskopf, Adam B. Wilcox
Extracting Patient-level Social Determinants of Health into the OMOP Common Data Model. AMIA (2021)
Nicholas J. Dobbins, Clifford H. Spital, Robert A. Black, Jason M. Morrison, Bas de Veer, Elizabeth Zampino, Robert D. Harrington, Bethene D. Britt, Kari A. Stephens, Adam B. Wilcox, Peter Tarczy-Hornoch, Sean D. Mooney
Leaf: an open-source, model-agnostic, data-driven web application for cohort discovery and translational biomedical research. J. Am. Medical Informatics Assoc. 27 (1) (2020)