Matthieu Vignes

Publication Activity (10 Years)

Years Active: 2007-2021
Publications (10 Years): 6

Top Topics

Inference In Graphical Models

Expectation Maximization

Biological Networks

Penalized Likelihood

Top Venues

Rev. d'Intelligence Artif.

Publications

Elva María Novoa-del-Toro, Efrén Mezura-Montes, Matthieu Vignes, Morgane Térézol, Frédérique Magdinier, Laurent Tichit, Anaïs Baudot
A multi-objective genetic algorithm to find active modules in multiplex biological networks. PLoS Comput. Biol. 17 (8) (2021)
Olivia Angelin-Bonnet, Patrick J. Biggs, Samantha J. Baldwin, Susan Thomson, Matthieu Vignes
sismonr: simulation of in silico multi-omic networks with adjustable ploidy and post-transcriptional regulation in R. Bioinform. 36 (9) (2020)
Olivia Angelin-Bonnet, Patrick J. Biggs, Matthieu Vignes
The sismonr Package: Simulation of In Silico Multi-Omic Networks in R. BIBM (2018)
Magali Champion, Victor Picheny, Matthieu Vignes
-penalized likelihood. Stat. Comput. 28 (6) (2018)
Magali Champion, Victor Picheny, Matthieu Vignes
-penalized likelihood. Stat. Comput. 28 (4) (2018)
Nathalie Peyrard, Simon de Givry, Alain Franc, Stéphane Robin, Régis Sabbadin, Thomas Schiex, Matthieu Vignes
Exact and approximate inference in graphical models: variable elimination and beyond. CoRR (2015)
Jimmy Vandel, Brigitte Mangin, Matthieu Vignes, Damien Leroux, Olivier Loudet, Marie-Laure Martin-Magniette, Simon de Givry
Inférence de réseaux de régulation de gènes au travers de scores étendus dans les réseaux bayésiens. Rev. d'Intelligence Artif. 26 (6) (2012)
Matthieu Vignes, Juliette Blanchet, Damien Leroux, Florence Forbes
: a software for biological module detection when data is incomplete, high dimensional and dependent. Bioinform. 27 (6) (2011)
Matthieu Vignes, Florence Forbes
Gene Clustering via Integrated Markov Models Combining Individual and Pairwise Features. IEEE ACM Trans. Comput. Biol. Bioinform. 6 (2) (2009)
Juliette Blanchet, Matthieu Vignes
A Model-Based Approach to Gene Clustering with Missing Observation Reconstruction in a Markov Random Field Framework. J. Comput. Biol. 16 (3) (2009)
Juliette Blanchet, Matthieu Vignes
Combined expression data with missing values and gene interaction network analysis: a Markovian integrated approach. BIBE (2007)