Mathew J. Palakal

Publication Activity (10 Years)

Years Active: 1985-2016
Publications (10 Years): 1

Top Topics

Biologically Meaningful

Colorectal Cancer

Language Processing

Systems Biology

Top Venues

BMC Syst. Biol.

Publications

Shenhui Jiang, Shiaofen Fang, Sam Bloomquist, Jeremy Keiper, Mathew J. Palakal, Yuni Xia, Shaun J. Grannis
Healthcare Data Visualization: Geospatial and Temporal Integration. VISIGRAPP (2: IVAPP) (2016)
Meeta Pradhan, Kshithija Nagulapalli, Lakenvia Ledford, Yogesh Pandit, Mathew J. Palakal
A system biology approach for understanding the miRNA regulatory network in colon rectal cancer. Int. J. Data Min. Bioinform. 11 (1) (2015)
Saeed Mehrabi, Anand Krishnan, Alexandra M. Roch, Heidi Schmidt, Dingcheng Li, Joe Kesterson, Chris Beesley, Paul R. Dexter, C. Max Schmidt, Mathew J. Palakal, Hongfang Liu
Identification of Patients with Family History of Pancreatic Cancer - Investigation of an NLP System Portability. MedInfo (2015)
Saeed Mehrabi, Anand Krishnan, Sunghwan Sohn, Alexandra M. Roch, Heidi Schmidt, Joe Kesterson, Chris Beesley, Paul R. Dexter, C. Max Schmidt, Hongfang Liu, Mathew J. Palakal
DEEPEN: A negation detection system for clinical text incorporating dependency relation into NegEx. J. Biomed. Informatics 54 (2015)
Saeed Mehrabi, Sunghwan Sohn, Dingcheng Li, Joshua J. Pankratz, Terry M. Therneau, Jennifer L. St. Sauver, Hongfang Liu, Mathew J. Palakal
Temporal Pattern and Association Discovery of Diagnosis Codes Using Deep Learning. ICHI (2015)
Deepali Jhamb, Meeta Pradhan, Akshay Desai, Mathew J. Palakal, Premkumar Duraiswamy
A systems biology analysis for the whole genome sequencing data. ICCABS (2014)
K. M. Shabana, K. A. Abdul Nazeer, Meeta Pradhan, Mathew J. Palakal
A computational method for drug repositioning using publicly available gene expression data. ICCABS (2014)
Deepali Jhamb, Anand Krishnan, Meelia Palakal, Yogesh Pandit, Mathew J. Palakal, Premkumar Duraiswamy
Identification of protein interaction methods from biomedical literature. ICCABS (2014)
T. A. Arunanand, K. A. Abdul Nazeer, Mathew J. Palakal, Meeta Pradhan
A nature-inspired hybrid Fuzzy C-means algorithm for better clustering of biological data sets. ICDSE (2014)
Saeed Mehrabi, C. Max Schmidt, Joshua A. Waters, Chris Beesley, Anand Krishnan, Joe Kesterson, Paul R. Dexter, Mohammed A. Al-Haddad, William M. Tierney, Mathew J. Palakal
An Efficient Pancreatic Cyst Identification Methodology Using Natural Language Processing. MedInfo (2013)
Meeta Pradhan, Akshay Desai, Mathew J. Palakal
Systems biology approach to stage-wise characterization of epigenetic genes in lung adenocarcinoma. BMC Syst. Biol. 7 (2013)
Meeta Pradhan, Kshithija Nagulapalli, Mathew J. Palakal
Cliques for the identification of gene signatures for colorectal cancer across population. BMC Syst. Biol. 6 (S-3) (2012)
Tulip Nandu, Meeta Pradhan, Mathew J. Palakal
Elucidating gene signatures that control the circadian rhythm in cyanobacteria using bioinformatics methods. BMC Bioinform. 13 (S-18) (2012)
Yue W. Webster, Ernst R. Dow, Jacob Koehler, Ranga Chandra Gudivada, Mathew J. Palakal
Leveraging health social networking communities in translational research. J. Biomed. Informatics 44 (4) (2011)
Deepali Jhamb, Nandini Rao, Derek J. Milner, Fengyu Song, Jo Ann Cameron, David L. Stocum, Mathew J. Palakal
Network based transcription factor analysis of regenerating axolotl limbs. BMC Bioinform. 12 (2011)
Yue W. Webster, Ranga Chandra Gudivada, Ernst R. Dow, Jacob Koehler, Mathew J. Palakal
A framework for cross-disciplinary hypothesis generation. SAC (2010)
Zi Ning, Ji Soo Yi, Mathew J. Palakal, Anna M. McDaniel
OncoViz: a user-centric mining and visualization tool for cancer-related literature. SAC (2010)
Snehasis Mukhopadhyay, Mathew J. Palakal, Kalyan Maddu
Multi-way association extraction and visualization from biological text documents using hyper-graphs: Applications to genetic association studies for diseases. Artif. Intell. Medicine 49 (3) (2010)
Yue W. Webster, Ranga Chandra Gudivada, Ernst R. Dow, Jacob Koehler, Mathew J. Palakal
A Hybrid Method to Discover and Rank Cross-Disciplinary Associations. BIBM (2009)
Steven Mannheimer, Mexhid Ferati, Donald Huckleberry, Mathew J. Palakal
Using Audemes as a Learning Medium for the Visually Impaired. HEALTHINF (2009)
Snehasis Mukhopadhyay, Shengquan Peng, Rajeev R. Raje, Mathew J. Palakal, Javed Mostafa
Comparison of Some Single-agent and Multi-agent Information Filtering Systems on a Benchmark Text Data Set. SEKE (2009)
Steven Mannheimer, Mexhid Ferati, Davide Bolchini, Mathew J. Palakal
Educational Sound Symbols for the Visually Impaired. HCI (5) (2009)
Snehasis Mukhopadhyay, Mathew J. Palakal, Kalyan Maddu
Multi-way Association Extraction from Biological Text Documents Using Hyper-Graphs. BIBM (2008)
Mathew J. Palakal, William Perrizo, Kanagasabai Rajaraman
Special track on Bioinformatics: editorial message. SAC (2008)
Anna Antony, Srilaxmi Basetty, Shielly Hartanto, Mathew J. Palakal
Computational approach to biological validation of protein-protein interactions discovered using literature mining. SAC (2008)
Pavithra G. Naidu, Mathew J. Palakal, Shielly Hartanto
On-the-fly data integration models for biological databases. SAC (2007)
Rani J. Swargam, Mathew J. Palakal
The role of least frequent item sets in association discovery. ICDIM (2007)
Mathew J. Palakal, William Perrizo
Editorial message: special track on bioinformatics. SAC (2006)
Yuan-Shun Dai, Mathew J. Palakal, Shielly Hartanto, Xiaolong Wang, Yanming Guo
A Grid-Based Pseudo-Cache solution for MISD biomedical problems with high confidentiality and efficiency. Int. J. Bioinform. Res. Appl. 2 (3) (2006)
Niranjan Jayadevaprakash, Snehasis Mukhopadhyay, Mathew J. Palakal
Generating association graphs of non-cooccurring text objects using transitive methods. SAC (2005)
Ramana M. Pidaparti, Mathew J. Palakal, Long Fang
Cellular Automata Approach to Aircraft Corrosion Growth. Int. J. Artif. Intell. Tools 14 (1-2) (2005)
Snehasis Mukhopadhyay, Shengquan Peng, Rajeev R. Raje, Javed Mostafa, Mathew J. Palakal
Distributed multi-agent information filtering - A comparative study. J. Assoc. Inf. Sci. Technol. 56 (8) (2005)
Mathew J. Palakal, Sven Rahmann, Birong Liao
Editorial message: special track on bioinformatics. SAC (2005)
Ramana Pidaparti, Mathew J. Palakal, Long Fong
Cellular Automata Approach to Aircraft Corrosion Pit Growth. FLAIRS Conference (2004)
Kamal Kumar, Mathew J. Palakal, Snehasis Mukhopadhyay, Matthew J. Stephens, Huian Li
BioMap: toward the development of a knowledge base of biomedical literature. SAC (2004)
Rajeev R. Raje, Daocheng Zhu, Snehasis Mukhopadhyay, Liying Tang, Mathew J. Palakal, Javed Mostafa
COBioSIFTER - A CORBA-Based Distributed Multi-Agent Biological Information Management System. Clust. Comput. 7 (4) (2004)
Warren T. Jones, Mathew J. Palakal, Jake Yue Chen
Editorial message: special track on bioinformatics. SAC (2004)
Javed Mostafa, Snehasis Mukhopadhyay, Mathew J. Palakal
Simulation Studies of Different Dimensions of Users' Interests and their Impact on User Modeling and Information Filtering. Inf. Retr. 6 (2) (2003)
Snehasis Mukhopadhyay, Changhong Tang, Jeffrey Huang, Mathew J. Palakal
Genetic Sequence Classification and its Application to Cross-Species Homology Detection. J. VLSI Signal Process. 35 (3) (2003)
Mathew J. Palakal, Matthew J. Stephens, Snehasis Mukhopadhyay, Rajeev R. Raje, Simon Rhodes
Identification of Biological Relationships from Text Documentsusing Efficient Computational Methods. J. Bioinform. Comput. Biol. 1 (2) (2003)
Snehasis Mukhopadhyay, Shengquan Peng, Rajeev R. Raje, Mathew J. Palakal, Javed Mostafa
Multi-agent information classification using dynamic acquaintance lists. J. Assoc. Inf. Sci. Technol. 54 (10) (2003)
Warren T. Jones, Mathew J. Palakal
Bioinformatics Track Editorial. SAC (2003)
Yueyu Fu, Travis Bauer, Javed Mostafa, Mathew J. Palakal, Snehasis Mukhopadhyay
Concept extraction and association from cancer literature. WIDM (2002)
Rajeev R. Raje, Mingyong Qiao, Snehasis Mukhopadhyay, Mathew J. Palakal, Shengquan Peng, Javed Mostafa
Homogeneous Agent-Based Distributed Information Filtering. Clust. Comput. 5 (4) (2002)
Deepa Umamaheswaran, Jeffrey Huang, Mathew J. Palakal, Suzali Suyut
Video Scene Analysis Using Best Basis Wavelets and Learnin Strategies. JCIS (2002)
Mathew J. Palakal, Snehasis Mukhopadhyay, Javed Mostafa, Rajeev R. Raje, Mathias N'Cho, Santosh Mishra
An intelligent biological information management system. Bioinform. 18 (10) (2002)
Mathew J. Palakal, Snehasis Mukhopadhyay, Javed Mostafa
An intelligent biological information management system. SAC (2002)
Mathew J. Palakal, Matthew J. Stephens, Snehasis Mukhopadhyay, Rajeev R. Raje, Simon Rhodes
A Multi-Level Text Mining Method to Extract Biological Relationships. CSB (2002)
Jeffrey Huang, Deepa Umamaheswaran, Mathew J. Palakal
Video Indexing and Retrieval for Archeological Digital Library, CLIOH. CIVR (2002)
Snehasis Mukhopadhyay, Changhong Tang, Jeffrey Huang, Mulong Yu, Mathew J. Palakal
A comparative study of genetic sequence classification algorithms. NNSP (2002)
Matthew J. Stephens, Mathew J. Palakal, Snehasis Mukhopadhyay, Rajeev R. Raje, Javed Mostafa
Detecting Gene Relations from MEDLINE Abstracts. Pacific Symposium on Biocomputing (2001)
Shengquan Peng, Snehasis Mukhopadhyay, Rajeev R. Raje, Mathew J. Palakal, Javed Mostafa
A Comparison Between Single-agent and Multi-agent Classification of Documents. IPDPS (2001)
Javed Mostafa, Luz Marina Quiroga, Mathew J. Palakal
Filtering Medical Documents Using Automated and Human Classification Methods. J. Am. Soc. Inf. Sci. 49 (14) (1998)
Mathew J. Palakal, Frederick W. Myers, Carla L. Boyd
An interactive learning environment for breadth-first computing science curriculum. SIGCSE (1998)
Michael Boyles, Javed Mostafa, Snehasis Mukhopadhyay, Mathew J. Palakal, Artur Papiez, Nila Patel, Rajeev R. Raje
A Bidding Mechanism for Web-Based Agents Involved in Information Classification. World Wide Web 1 (3) (1998)
S. Y. P. Chien, L. Q. Xue, Mathew J. Palakal
Task planning for a mobile robot in an indoor environment using object-oriented domain information. IEEE Trans. Syst. Man Cybern. Part B 27 (6) (1997)
Javed Mostafa, Snehasis Mukhopadhyay, Wai Lam, Mathew J. Palakal
A Multilevel Approach to Intelligent Information Filtering: Model, System, and Evaluation. ACM Trans. Inf. Syst. 15 (4) (1997)
Wai Lam, Snehasis Mukhopadhyay, Javed Mostafa, Mathew J. Palakal
Detection of Shifts in User Interests for Personalized Information Filtering. SIGIR (1996)
Q. Xue, Y. P. Chien, Yuanli Feng, Mathew J. Palakal
A Task Planner for Intelligent Mobile Robots using Subgoal Priority Information. Int. J. Artif. Intell. Tools 3 (1) (1994)
Anand V. Hudli, Mathew J. Palakal, Michael J. Zoran
A neural network based expert system model. ICTAI (1991)
Renato de Mori, Mathew J. Palakal, Piero Cosi
Perceptual Models for Automatic Speech Recognition Systems. Adv. Comput. 31 (1990)
Mathew J. Palakal, Michael J. Zoran
Feature extraction from speech spectrograms using multi-layered network models. TAI (1989)
Renato de Mori, Ettore Merlo, Mathew J. Palakal, Jean Rouat
Use of Procedural Knowledge for Automatic Speech Recognition. IJCAI (1987)
Renato de Mori, Mathew J. Palakal
On the Use of a Taxonomy of Time-Frequency Morphologies for Automatic Speech Recognition. IJCAI (1985)