Maciej Rybinski

Publication Activity (10 Years)

Years Active: 2014-2023
Publications (10 Years): 26

Top Topics

Clinical Trials

Semantic Relatedness

Biomedical Information Retrieval

Question Answering

Top Venues

Publications

Maciej Rybinski, Stephen Wan, Sarvnaz Karimi, Cécile Paris, Brian Jin, Neil I. Huth, Peter J. Thorburn, Dean P. Holzworth
SciHarvester: Searching Scientific Documents for Numerical Values. SIGIR (2023)
Maciej Rybinski, Vincent Nguyen, Sarvnaz Karimi
A Self-Learning Resource-Efficient Re-Ranking Method for Clinical Trials Search. CIKM (2023)
Necva Bölücü, Maciej Rybinski, Stephen Wan
impact of sample selection on in-context learning for entity extraction from scientific writing. EMNLP (Findings) (2023)
Mong Yuan Sim, Xiang Dai, Maciej Rybinski, Sarvnaz Karimi
CSIRO Data61 Team at BioLaySumm Task 1: Lay Summarisation of Biomedical Research Articles Using Generative Models. BioNLP@ACL (2023)
Jorge Rodríguez-Revello, Cristóbal Barba-González, Maciej Rybinski, Ismael Navas-Delgado
KNIT: Ontology reusability through knowledge graph exploration. Expert Syst. Appl. 228 (2023)
Vincent Nguyen, Sarvnaz Karimi, Maciej Rybinski, Zhenchang Xing
MedRedQA for Medical Consumer Question Answering: Dataset, Tasks, and Neural Baselines. IJCNLP (1) (2023)
Vincent Nguyen, Maciej Rybinski, Sarvnaz Karimi, Zhenchang Xing
Search like an expert: Reducing expertise disparity using a hybrid neural index for COVID-19 queries. J. Biomed. Informatics 127 (2022)
Vincent Nguyen, Maciej Rybinski, Sarvnaz Karimi
Matching a Patient from An Admission Note to Clinical Trials: Experiments with Query Generation and Neural-Ranking. TREC (2022)
Maciej Rybinski, Liam Watts, Sarvnaz Karimi
A2A-API: A Prototype for Biomedical Information Retrieval Research and Benchmarking. SIGIR (2022)
Maciej Rybinski, Sarvnaz Karimi
Will Sorafenib Help?: Treatment-aware Reranking in Precision Medicine Search. CIKM (2021)
Diego Mollá, Urvashi Khanna, Dima Galat, Vincent Nguyen, Maciej Rybinski
Query-Focused Extractive Summarisation for Finding Ideal Answers to Biomedical and COVID-19 Questions. CoRR (2021)
Diego Mollá, Urvashi Khanna, Dima Galat, Vincent Nguyen, Maciej Rybinski
Query-Focused Extractive Summarisation for Finding Ideal Answers to Biomedical and COVID-19 Questions. CLEF (Working Notes) (2021)
Xiang Dai, Maciej Rybinski, Sarvnaz Karimi
SearchEHR: A Family History Search System for Clinical Decision Support. CIKM (2021)
Maciej Rybinski, Vincent Nguyen, Sarvnaz Karimi
CSIROmed Team Report of TREC 2021 Clinical Trials track: Experiments with BERT Reranking Methods. TREC (2021)
Maciej Rybinski, Sarvnaz Karimi, Aleney Khoo
Science2Cure: A Clinical Trial Search Prototype. SIGIR (2021)
Maciej Rybinski, Sarvnaz Karimi
CSIROmed at TREC Precision Medicine 2020. TREC (2020)
Vincent Nguyen, Maciej Rybinski, Sarvnaz Karimi, Zhenchang Xing
Searching Scientific Literature for Answers on COVID-19 Questions. CoRR (2020)
Maciej Rybinski, Sarvnaz Karimi, Vincent Nguyen, Cécile Paris
A2A: a platform for research in biomedical literature search. BMC Bioinform. (19) (2020)
Maciej Rybinski, Jerry Xu, Sarvnaz Karimi
Clinical trial search: Using biomedical language understanding models for re-ranking. J. Biomed. Informatics 109 (2020)
Maciej Rybinski, Sarvnaz Karimi, Cécile Paris
CSIRO at 2019 TREC Precision Medicine Track. TREC (2019)
Ismael Navas Delgado, José García-Nieto, Esteban López-Camacho, Maciej Rybinski, Rocio Lavado-Valenzuela, Miguel Ángel Berciano Guerrero, José Francisco Aldana Montes
VIGLA-M: visual gene expression data analytics. BMC Bioinform. (4) (2019)
Ernesto Jiménez-Ruiz, Tzanina Saveta, Ondrej Zamazal, Sven Hertling, Michael Röder, Irini Fundulaki, Axel-Cyrille Ngonga Ngomo, Mohamed Ahmed Sherif, Amina Annane, Zohra Bellahsene, Sadok Ben Yahia, Gayo Diallo, Daniel Faria, Marouen Kachroudi, Abderrahmane Khiat, Patrick Lambrix, Huanyu Li, Maximilian Mackeprang, Majid Mohammadi, Maciej Rybinski, Booma Sowkarthiga Balasubramani, Cássia Trojahn
Introducing the HOBBIT platform into the ontology alignment evaluation campaign. OM@ISWC (2018)
Maciej Rybinski, William Miller, Javier Del Ser, Miren Nekane Bilbao, José Francisco Aldana Montes
On the Design and Tuning of Machine Learning Models for Language Toxicity Classification in Online Platforms. IDC (2018)
Maciej Rybinski, José Francisco Aldana Montes
DomESA: a novel approach for extending domain-oriented lexical relatedness calculations with domain-specific semantics. J. Intell. Inf. Syst. 49 (3) (2017)
Maciej Rybinski, José Francisco Aldana Montes
tESA: a distributional measure for calculating semantic relatedness. J. Biomed. Semant. 7 (2016)
Maciej Rybinski, María del Mar Roldán García, José García-Nieto, José Francisco Aldana Montes
DisMatch results for OAEI 2016. OM@ISWC (2016)
Ismael Navas Delgado, María Jesús García-Godoy, Esteban López-Camacho, Maciej Rybinski, Armando Reyes-Palomares, Miguel Angel Medina, José Francisco Aldana Montes
kpath: integration of metabolic pathway linked data. Database J. Biol. Databases Curation 2015 (2015)
Maciej Rybinski, José Francisco Aldana Montes
Calculating semantic relatedness for biomedical use in a knowledge-poor environment. BMC Bioinform. 15 (S-14) (2014)