Kazutaka Katoh

Publication Activity (10 Years)

Years Active: 2007-2019
Publications (10 Years): 5

Top Topics

Image Alignment

Protein Sequences

Multiple Sequence Alignments

Phylogenetic Trees

Top Venues

Nucleic Acids Res.

Briefings Bioinform.

Publications

John Rozewicki, Songling Li, Karlou Mar Amada, Daron M. Standley, Kazutaka Katoh
MAFFT-DASH: integrated protein sequence and structural alignment. Nucleic Acids Res. 47 (Webserver-Issue) (2019)
Kazutaka Katoh, John Rozewicki, Kazunori D. Yamada
MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Briefings Bioinform. 20 (4) (2019)
Tsukasa Nakamura, Kazunori D. Yamada, Kentaro Tomii, Kazutaka Katoh
Parallelization of MAFFT for large-scale multiple sequence alignments. Bioinform. 34 (14) (2018)
Kazunori D. Yamada, Kentaro Tomii, Kazutaka Katoh
Application of the MAFFT sequence alignment program to large data - reexamination of the usefulness of chained guide trees. Bioinform. 32 (21) (2016)
Kazutaka Katoh, Daron M. Standley
A simple method to control over-alignment in the MAFFT multiple sequence alignment program. Bioinform. 32 (13) (2016)
Itamar Sela, Haim Ashkenazy, Kazutaka Katoh, Tal Pupko
GUIDANCE2: accurate detection of unreliable alignment regions accounting for the uncertainty of multiple parameters. Nucleic Acids Res. 43 (Webserver-Issue) (2015)
Shigehiro Kuraku, Christian M. Zmasek, Osamu Nishimura, Kazutaka Katoh
aLeaves facilitates on-demand exploration of metazoan gene family trees on MAFFT sequence alignment server with enhanced interactivity. Nucleic Acids Res. 41 (Webserver-Issue) (2013)
Kazutaka Katoh, Martin C. Frith
Adding unaligned sequences into an existing alignment using MAFFT and LAST. Bioinform. 28 (23) (2012)
Kazutaka Katoh, Hiroyuki Toh
Parallelization of the MAFFT multiple sequence alignment program. Bioinform. 26 (15) (2010)
Kazutaka Katoh, Hiroyuki Toh
Recent developments in the MAFFT multiple sequence alignment program. Briefings Bioinform. 9 (4) (2008)
Kazutaka Katoh, Hiroyuki Toh
Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework. BMC Bioinform. 9 (2008)
Kazutaka Katoh, Hiroyuki Toh
PartTree: an algorithm to build an approximate tree from a large number of unaligned sequences. Bioinform. 23 (3) (2007)