Kathryn M. Cooper

Publication Activity (10 Years)

Years Active: 2015-2021
Publications (10 Years): 10

Top Topics

Interaction Networks

Biological Networks

Network Analysis

Top Venues

Int. J. Comput. Biol. Drug Des.

BIOSTEC (Selected Papers)

Publications

William Gasper, Kathryn M. Cooper, Nathan Cornelius, Hesham Ali
Parallel Planar Approximation for Large Networks. BIBM (2021)
Kathryn M. Cooper, Nathan Cornelius, William Gasper, Sanjukta Bhowmick, Hesham Ali
On the Planarity of Validated Complexes of Model Organisms in Protein-Protein Interaction Networks. ICCS (1) (2020)
William Gasper, Kathryn M. Cooper, Nathan Cornelius, Hesham Ali, Sanjukta Bhowmick
Characterization of S. cerevisiae Protein Complexes by Representative DDI Graph Planarity. BCB (2020)
Kathryn M. Cooper, Wail Hassan, Hesham Ali
Identification of temporal network changes in short-course gene expression from C. elegans reveals structural volatility. Int. J. Comput. Biol. Drug Des. 12 (2) (2019)
Kimia Ameri, Kathryn M. Cooper
Network Analysis of Antibiotic Resistance Identifies Compelling Mutations across Pathways. BIBM (2019)
Hakimeh Ameri, Kathryn M. Cooper
A compartmental network model for the spread of whooping cough. BIBM (2017)
Qianran Li, Kathryn M. Cooper
Analysis of structural measurements in correlation networks built from gene expression data across different tissue types in Mus musculus. BIBM (2017)
Kathryn M. Cooper, Wail Hassan, Hesham Ali
A network-based approach to mine temporal genes exhibiting significant expression variation in Caenorhabditis elegans. BIBM (2017)
Grogan W. Huff, Kathryn M. Cooper
Correlation networks: Biologically driven relationships from gene expression data. BIBM (2017)
Kathryn M. Cooper, Dhundy Bastola, Robin A. Gandhi, Dario Ghersi, Steven H. Hinrichs, Marsha Morien, Ann L. Fruhling
Forecasting the Spread of Mosquito-Borne Disease using Publicly Accessible Data: A Case Study in Chikungunya. AMIA (2016)
Kathryn M. Cooper, Stephen Bonasera, Hesham H. Ali
Evaluating the Robustness of Correlation Network Analysis in the Aging Mouse Hypothalamus. BIOSTEC (Selected Papers) (2015)
Kathryn M. Cooper, Prasuna Vemuri, Hesham H. Ali
On the comparison of state- and transition-based analysis of biological relevance in gene co-expression networks. BIBM (2015)
Kathryn M. Cooper, Stephen Bonasera, Hesham H. Ali
Identifying Aging Genes in the Aging Mouse Hypothalamus Using Gateway Node Analysis of Correlation Networks. BIOINFORMATICS (2015)