Katharina Jasmin Hoff

Publication Activity (10 Years)

Years Active: 2008-2023
Publications (10 Years): 5

Top Topics

Labor Intensive

Genome Annotation

Top Venues

Genom. Proteom. Bioinform.

Nucleic Acids Res.

Publications

Tomás Bruna, Heng Li, Joseph Guhlin, Daniel Honsel, Steffen Herbold, Mario Stanke, Natalia Nenasheva, Matthis Ebel, Lars Gabriel, Katharina Jasmin Hoff
Galba: genome annotation with miniprot and AUGUSTUS. BMC Bioinform. 24 (1) (2023)
Lars Gabriel, Katharina Jasmin Hoff, Tomás Bruna, Mark Borodovsky, Mario Stanke
TSEBRA: transcript selector for BRAKER. BMC Bioinform. 22 (1) (2021)
Mario Stanke, Willy Bruhn, Felix Becker, Katharina Jasmin Hoff
VARUS: sampling complementary RNA reads from the sequence read archive. BMC Bioinform. 20 (1) (2019)
Katharina Jasmin Hoff
MakeHub: Fully Automated Generation of UCSC Genome Browser Assembly Hubs. Genom. Proteom. Bioinform. 17 (5) (2019)
Katharina Jasmin Hoff, Simone Lange, Alexandre Lomsadze, Mark Borodovsky, Mario Stanke
BRAKER1: Unsupervised RNA-Seq-Based Genome Annotation with GeneMark-ET and AUGUSTUS. Bioinform. 32 (5) (2016)
Katharina Jasmin Hoff, Mario Stanke
WebAUGUSTUS - a web service for training AUGUSTUS and predicting genes in eukaryotes. Nucleic Acids Res. 41 (Webserver-Issue) (2013)
Katharina Jasmin Hoff, Thomas Lingner, Peter Meinicke, Maike Tech
Orphelia: predicting genes in metagenomic sequencing reads. Nucleic Acids Res. 37 (Web-Server-Issue) (2009)
Katharina Jasmin Hoff, Maike Tech, Thomas Lingner, Rolf Daniel, Burkhard Morgenstern, Peter Meinicke
Gene prediction in metagenomic fragments: A large scale machine learning approach. BMC Bioinform. 9 (2008)