Julien Colombelli

Publication Activity (10 Years)

Years Active: 2020-2021
Publications (10 Years): 5

Top Topics

Scientific Workflows

Fluorescence Microscopy

Top Venues

Frontiers Bioinform.

PLoS Comput. Biol.

Publications

Perrine Paul-Gilloteaux, Sébastien Tosi, Jean-Karim Hériché, Alban Gaignard, Hervé Ménager, Raphaël Marée, Volker Bäcker, Anna H. Klemm, Matús Kalas, Chong Zhang, Kota Miura, Julien Colombelli
Bioimage analysis workflows: community resources to navigate through a complex ecosystem. F1000Research 10 (2021)
Sébastien Tosi, Anna Lladó, Lídia Bardia, Elena Rebollo, Anna Godo, Petra Stockinger, Julien Colombelli
AutoScanJ: A Suite of ImageJ Scripts for Intelligent Microscopy. Frontiers Bioinform. 1 (2021)
Sébastien Tosi, Lídia Bardia, Maria Jose Barallobre, Arrate Muñoz-Barrutia, María Luisa Soto-Montenegro, Julien Colombelli
MosaicExplorerJ: Interactive stitching of terabyte-size tiled datasets from lightsheet microscopy. F1000Research 9 (2020)
Pol Kennel, Jules Dichamp, Corinne Barreau, Christophe Guissard, Lise Teyssedre, Jacques Rouquette, Julien Colombelli, Anne Lorsignol, Louis Casteilla, Franck Plouraboué
From whole-organ imaging to in-silico blood flow modeling: A new multi-scale network analysis for revisiting tissue functional anatomy. PLoS Comput. Biol. 16 (2) (2020)
Sébastien Tosi, Lídia Bardia, Maria Jose Filgueira, Alexandre Calon, Julien Colombelli
LOBSTER: an environment to design bioimage analysis workflows for large and complex fluorescence microscopy data. Bioinform. 36 (8) (2020)